List of known and putative regulatory motifs
Names of putative motifs, derived from
MIPs , are prefixed with m_
At the moment the promoters assigned to each motif are given by their serial number
in this list of ORFs' Y names So for example, Rap1's first
ORF in the Rap1 ace file is number 1316 -
thus the Rap1 motif occures at the promoter YFL034C-A_YFL034W (which is the 1316th on the ORFs' Y name list
we'll make the ORFs more easily accessible soon...
NOTE: in case of a divergent promoter two ORFs are associated with the motif !!
RAP1
RPN4
GCN4
MCB
m_MERE17
m_MERE11
m_RPE17
HAP234
m_metal_ion_transporters_orfnum2SD_n6
m_fermentation_orfnum2SD_n21
m_fermentation_orfnum2SD_n3
m_amino-acid_transport_orfnum2SD_n3
m_ion_transporters_orfnum2SD_n7
MIG1
m_allantoin_and_allantoate_transporters_orfnum2SD_n6
m_phosphate_transport_orfnum2SD_n13
m_RPE8
m_amino-acid_transport_orfnum2SD_n14
AFT1
m_regulation_of_nitrogen_and_sulphur_utilization_orfnum2SD_n13
m_MERE16
m_glyoxylate_cycle_orfnum2SD_n7
m_metabolism_of_energy_reserves_orfnum2SD_n8
m_tricarboxylic-acid_pathway_orfnum2SD_n3
m_regulation_of_nitrogen_and_sulphur_utilization_orfnum2SD_n7
m_purine_and_pyrimidine_transporters_orfnum2SD_n6
m_c-compound_carbohydrate_transport_orfnum2SD_n11
STRE'
m_allantoin_and_allantoate_transporters_orfnum2SD_n11
m_LFTE17
m_pentose-phosphate_pathway_orfnum2SD_n7
m_regulation_of_nucleotide_metabolism_orfnum2SD_n5
CCA
mRRPE
m_organization_of_chromosome_structure_orfnum2SD_n20
m_abc_transporters_orfnum2SD_n5
m_cell_death_orfnum2SD_n8
m_MERE4
m_amino-acid_transport_orfnum2SD_n13
m_biogenesis_of_cytoskeleton_orfnum2SD_n5
m_other_cation_transporters_orfnum2SD_n3
m_other_energy_generation_activities_orfnum2SD_n16
m_amino-acid_biosynthesis_orfnum2SD_n9
m_nutritional_response_pathway_orfnum2SD_n3
m_nutritional_response_pathway_orfnum2SD_n8
m_breakdown_of_lipids_fatty_acids_and_isoprenoids_orfnum2SD_n8
m_other_energy_generation_activities_orfnum2SD_n12
m_other_pheromone_response_activities_orfnum2SD_n5
m_regulation_of_amino-acid_metabolism_orfnum2SD_n11
m_nitrogen_and_sulphur_transport_orfnum2SD_n14
m_drug_transporters_orfnum2SD_n7
m_RPE72
m_organization_of_cytoplasm_orfnum2SD_n27
CSRE
m_peroxisomal_organization_orfnum2SD_n3
PHO4
m_lipid_and_fatty-acid_transport_orfnum2SD_n11
m_anion_transporters_orfnum2SD_n10
m_sugar_and_carbohydrate_transporters_orfnum2SD_n6
m_biosynthesis_of_vitamins_cofactors_and_prosthetic_groups_orfnum2SD_n8
m_deoxyribonucleotide_metabolism_orfnum2SD_n5
m_deoxyribonucleotide_metabolism_orfnum2SD_n27
m_deoxyribonucleotide_metabolism_orfnum2SD_n4
m_RPE6
m_pentose-phosphate_pathway_orfnum2SD_n21
m_polynucleotide_degradation_orfnum2SD_n3
m_glycolysis_and_gluconeogenesis_orfnum2SD_n4
m_abc_transporters_orfnum2SD_n2
m_pentose-phosphate_pathway_orfnum2SD_n5
m_pheromone_response_generation_orfnum2SD_n4
m_abc_transporters_orfnum2SD_n10
m_anion_transporters_orfnum2SD_n13
m_metal_ion_transporters_orfnum2SD_n10
m_stress_response_orfnum2SD_n24
m_metal_ion_transporters_orfnum2SD_n14
m_organization_of_cell_wall_orfnum2SD_n6
m_osmosensing_orfnum2SD_n6
m_other_cation_transporters_orfnum2SD_n8
m_ion_transporters_orfnum2SD_n4
m_glycolysis_and_gluconeogenesis_orfnum2SD_n11
m_organization_of_centrosome_orfnum2SD_n5
m_stress_response_orfnum2SD_n4
m_RPE21
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n16.scn
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n12.scn
m_regulation_of_nitrogen_and_sulphur_utilization_orfnum2SD_n12
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n7.scn
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n8.scn
m_cell_death_orfnum2SD_n22
m_other_mrna-transcription_activities_orfnum2SD_n11
m_tricarboxylic-acid_pathway_orfnum2SD_n6
m_ion_transporters_orfnum2SD_n3
m_phosphate_transport_orfnum2SD_n8
m_other_energy_generation_activities_orfnum2SD_n20
m_organization_of_chromosome_structure_orfnum2SD_n17
m_other_proteolytic_degradation_orfnum2SD_n2
m_organization_of_golgi_orfnum2SD_n7
m_other_energy_generation_activities_orfnum2SD_n9
m_amino-acid_transporters_orfnum2SD_n11
m_peroxisomal_organization_orfnum2SD_n6
m_lipid_transporters_orfnum2SD_n8
m_other_transcription_activities_orfnum2SD_n5
m_drug_transporters_orfnum2SD_n10
m_organization_of_plasma_membrane_orfnum2SD_n15
m_purine_and_pyrimidine_transporters_orfnum2SD_n17
m_tricarboxylic-acid_pathway_orfnum2SD_n9
m_c-compound_and_carbohydrate_utilization_orfnum2SD_n9
m_other_morphogenetic_activities_orfnum2SD_n8
m_nutritional_response_pathway_orfnum2SD_n7
m_morphogenesis_orfnum2SD_n5
m_organization_of_cell_wall_orfnum2SD_n8
m_anion_transporters_orfnum2SD_n4
m_glycolysis_and_gluconeogenesis_orfnum2SD_n27
m_anion_transporters_orfnum2SD_n15
m_anion_transporters_orfnum2SD_n22
m_ion_transporters_orfnum2SD_n11
m_ion_transporters_orfnum2SD_n10
m_anion_transporters_orfnum2SD_n20
m_deoxyribonucleotide_metabolism_orfnum2SD_n10
m_stress_response_orfnum2SD_n17
m_nitrogen_and_sulphur_transport_orfnum2SD_n9
m_organization_of_plasma_membrane_orfnum2SD_n17
m_other_cation_transporters_orfnum2SD_n14
m_other_cation_transporters_orfnum2SD_n7
m_other_cation_transporters_orfnum2SD_n5
m_deoxyribonucleotide_metabolism_orfnum2SD_n12
m_other_cation_transporters_orfnum2SD_n18
m_other_intracellular-transport_activities_orfnum2SD_n6
m_ion_transporters_orfnum2SD_n6
m_phosphate_utilization_orfnum2SD_n7
m_lysosomal_and_vacuolar_degradation_orfnum2SD_n3
m_organization_of_centrosome_orfnum2SD_n6
m_other_nutritional-response_activities_orfnum2SD_n10
m_ionic_homeostasis_orfnum2SD_n6
m_phosphate_metabolism_orfnum2SD_n16
m_metabolism_of_energy_reserves_orfnum2SD_n30
m_other_nutritional-response_activities_orfnum2SD_n11
m_pentose-phosphate_pathway_orfnum2SD_n14
m_other_transcription_activities_orfnum2SD_n8
m_other_transport_facilitators_orfnum2SD_n10
m_glyoxylate_cycle_orfnum2SD_n19
m_pentose-phosphate_pathway_orfnum2SD_n19
m_allantoin_and_allantoate_transporters_orfnum2SD_n18
m_peroxisomal_transport_orfnum2SD_n19
mPROTEOL18(m_proteolysis_orfnum2SD_n18)
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n20.scn
m_other_transport_facilitators_orfnum2SD_n5
STE12
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n31
m_chromatin_modification_orfnum2SD_n9
m_biogenesis_of_chromosome_structure_orfnum2SD_n18
m_RRSE3
m_nutritional_response_pathway_orfnum2SD_n12
m_peroxisomal_organization_orfnum2SD_n28
m_nucleotide_metabolism_orfnum2SD_n6
m_RPE69
m_other_proteolytic_degradation_orfnum2SD_n5
m_mitochondrial_biogenesis_orfnum2SD_n5
m_other_pheromone_response_activities_orfnum2SD_n8
m_pyrimidine-ribonucleotide_metabolism_orfnum2SD_n5
m_other_energy_generation_activities_orfnum2SD_n11
m_amino-acid_degradation_orfnum2SD_n27
m_other_energy_generation_activities_orfnum2SD_n22
m_other_proteolytic_degradation_orfnum2SD_n7
HSE
m_other_pheromone_response_activities_orfnum2SD_n14
m_regulation_of_amino-acid_metabolism_orfnum2SD_n10
m_other_proteolytic_degradation_orfnum2SD_n12
m_phosphate_transport_orfnum2SD_n5
m_other_pheromone_response_activities_orfnum2SD_n12
m_amino-acid_degradation_orfnum2SD_n29
m_organization_of_intracellular_transport_vesicles_orfnum2SD_n5
m_other_proteolytic_degradation_orfnum2SD_n8
m_fermentation_orfnum2SD_n10
m_utilization_of_vitamins_cofactors_and_prosthetic_groups_orfnum2SD_n5
m_organization_of_cell_wall_orfnum2SD_n20
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n22
m_homeostasis_of_other_ions_orfnum2SD_n30
m_transport_facilitation_orfnum2SD_n29
m_organization_of_cell_wall_orfnum2SD_n14
m_purine_and_pyrimidine_transporters_orfnum2SD_n10
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n18
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n29
m_pheromone_response_generation_orfnum2SD_n12
m_other_nucleotide-metabolism_activities_orfnum2SD_n17
m_fermentation_orfnum2SD_n18
m_metabolism_of_energy_reserves_orfnum2SD_n29
m_metabolism_of_energy_reserves_orfnum2SD_n27
m_vacuolar_and_lysosomal_organization_orfnum2SD_n8
m_meiosis_orfnum2SD_n3
m_other_cation_transporters_orfnum2SD_n13
m_fermentation_orfnum2SD_n4
m_fermentation_orfnum2SD_n5
m_c-compound_and_carbohydrate_utilization_orfnum2SD_n31
m_anion_transporters_orfnum2SD_n32
m_lipid_and_fatty-acid_transport_orfnum2SD_n7
m_anion_transporters_orfnum2SD_n23
m_organization_of_chromosome_structure_orfnum2SD_n12
m_c-compound_carbohydrate_transport_orfnum2SD_n18
m_other_signal-transduction_activities_orfnum2SD_n13
m_homeostasis_of_metal_ions_orfnum2SD_n20
m_anion_transporters_orfnum2SD_n17
m_RPE11
m_RPE57
m_anion_transporters_orfnum2SD_n9
m_homeostasis_of_metal_ions_orfnum2SD_n17
m_pheromone_response_generation_orfnum2SD_n10
m_other_signal-transduction_activities_orfnum2SD_n8
m_anion_transporters_orfnum2SD_n16
m_other_transport_facilitators_orfnum2SD_n15
m_organization_of_cell_wall_orfnum2SD_n10
m_OCSE15
m_lipid_and_fatty-acid_binding_orfnum2SD_n14
m_nitrogen_and_sulphur_transport_orfnum2SD_n5
m_lipid_and_fatty-acid_binding_orfnum2SD_n13
m_other_cell_growth_cell_division_and_dna_synthesis_activities_orfnum2SD_n14.scn
m_lipid_and_fatty-acid_binding_orfnum2SD_n12
m_deoxyribonucleotide_metabolism_orfnum2SD_n23
m_lysosomal_and_vacuolar_degradation_orfnum2SD_n8
m_RPE34
m_anion_transporters_orfnum2SD_n19
m_nitrogen_and_sulphur_utilization_orfnum2SD_n19
m_chromatin_modification_orfnum2SD_n21
m_phosphate_metabolism_orfnum2SD_n18
m_amino-acid_transport_orfnum2SD_n20
m_phosphate_utilization_orfnum2SD_n9
m_stress_response_orfnum2SD_n36
m_translational_control_orfnum2SD_n10
m_cytok9
m_deoxyribonucleotide_metabolism_orfnum2SD_n8
m_peroxisomal_organization_orfnum2SD_n8
m_amino-acid_transport_orfnum2SD_n18
m_amino-acid_degradation_orfnum2SD_n8
m_amino-acid_degradation_orfnum2SD_n7
m_sugar_and_carbohydrate_transporters_orfnum2SD_n14
m_nucleotide_transport_orfnum2SD_n9
m_intracellular_communication_orfnum2SD_n10
m_amino-acid_degradation_orfnum2SD_n24
m_transport_atpases_orfnum2SD_n17
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n22.scn
m_drug_transporters_orfnum2SD_n9
m_allantoin_and_allantoate_transporters_orfnum2SD_n12
m_detoxificaton_orfnum2SD_n39
m_allantoin_and_allantoate_transporters_orfnum2SD_n17
m_ion_transporters_orfnum2SD_n14
m_regulation_of_amino-acid_metabolism_orfnum2SD_n15
m_fermentation_orfnum2SD_n14
m_pentose-phosphate_pathway_orfnum2SD_n23
m_other_nutritional-response_activities_orfnum2SD_n6
m_peroxisomal_transport_orfnum2SD_n15
m_regulation_of_amino-acid_metabolism_orfnum2SD_n7
m_glyoxylate_cycle_orfnum2SD_n11
m_glyoxylate_cycle_orfnum2SD_n8
m_allantoin_and_allantoate_transporters_orfnum2SD_n7
m_fermentation_orfnum2SD_n12
m_c-compound_and_carbohydrate_metabolism_orfnum2SD_n8
m_glycolysis_and_gluconeogenesis_orfnum2SD_n14
m_other_energy_generation_activities_orfnum2SD_n17
m_other_proteolytic_degradation_orfnum2SD_n11
m_assembly_of_protein_complexes_orfnum2SD_n23
m_cell_death_orfnum2SD_n16
m_phosphate_transport_orfnum2SD_n18
m_metal_ion_transporters_orfnum2SD_n25
m_other_mrna-transcription_activities_orfnum2SD_n20
m_allantoin_and_allantoate_transporters_orfnum2SD_n13
m_extracellular_transport_orfnum2SD_n10
m_trna_processing_orfnum2SD_n9
m_regulation_of_nitrogen_and_sulphur_utilization_orfnum2SD_n10
m_organization_of_cytoplasm_orfnum2SD_n72
m_other_intracellular-transport_activities_orfnum2SD_n9
m_metal_ion_transporters_orfnum2SD_n26
m_utilization_of_vitamins_cofactors_and_prosthetic_groups_orfnum2SD_n6
m_nitrogen_and_sulphur_utilization_orfnum2SD_n15
m_c-compound_carbohydrate_transport_orfnum2SD_n23
m_intracellular_communication_orfnum2SD_n4
m_g-proteins_orfnum2SD_n13
m_PNDE6
m_amino-acid_metabolism_orfnum2SD_n14
m_lipid_transporters_orfnum2SD_n10
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n16
m_other_energy_generation_activities_orfnum2SD_n4
m_nitrogen_and_sulphur_utilization_orfnum2SD_n4
m_RPE49
m_amino-acid_degradation_orfnum2SD_n25
m_phosphate_utilization_orfnum2SD_n4
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n17
m_g-proteins_orfnum2SD_n11
m_other_cell_rescue_activities_orfnum2SD_n10
m_metabolism_of_cyclic_and_unusual_nucleotides_orfnum2SD_n5
m_lipid_and_fatty-acid_binding_orfnum2SD_n15
m_drug_transporters_orfnum2SD_n14
m_cytokinesis_orfnum2SD_n11
m_g-proteins_orfnum2SD_n12
m_other_cell_growth_cell_division_and_dna_synthesis_activities_orfnum2SD_n10.scn
m_peroxisomal_transport_orfnum2SD_n22
m_biogenesis_of_chromosome_structure_orfnum2SD_n9
m_trna_transcription_orfnum2SD_n10
m_rRSE10
m_cell_rescue_defense_cell_death_and_ageing_orfnum2SD_n20
m_biosynthesis_of_vitamins_cofactors_and_prosthetic_groups_orfnum2SD_n17.scn
m_other_signal-transduction_activities_orfnum2SD_n15
m_nitrogen_and_sulphur_utilization_orfnum2SD_n17
m_cellular_import_orfnum2SD_n12
m_other_protein-destination_activities_orfnum2SD_n7
m_metal_ion_transporters_orfnum2SD_n17
m_trna_processing_orfnum2SD_n6
m_cell_death_orfnum2SD_n15
m_anion_transporters_orfnum2SD_n27
m_amino-acid_degradation_orfnum2SD_n32
m_other_morphogenetic_activities_orfnum2SD_n7
m_proteolysis_orfnum2SD_n8
m_RPE58
m_RPE68
m_other_nucleotide-metabolism_activities_orfnum2SD_n18
m_detoxificaton_orfnum2SD_n34
m_RPE52
m_utilization_of_vitamins_cofactors_and_prosthetic_groups_orfnum2SD_n7
m_amino-acid_metabolism_orfnum2SD_n25
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n5.scn
m_cytokinesis_orfnum2SD_n10
m_pheromone_response_generation_orfnum2SD_n7
m_RPE32
m_nucleotide_metabolism_orfnum2SD_n11
m_biogenesis_of_cytoskeleton_orfnum2SD_n12
m_trna-synthetases_orfnum2SD_n6
m_cytoskeleton-dependenttransport_orfnum2SD_n4
m_regulation_of_c-compound_and_carbohydrate_utilization_orfnum2SD_n18
ABF1
ATRepeat
GAL
Leu3
LYS14
MET31-32
OAF1
PAC
PDR
PHO
REB1
STRE
ECB
ndt80(MSE)
Yap1
SCB
Gcr1
zap1
MCM1'
MCM1
SFF
SFF'
BAS1
Ume6(URS1)
SWI5
ALPHA1'
ALPHA1
ALPHA2'
ALPHA2