Synergistic Motif Pairs


For each motif pair the table lists the number of genes in the promoter of each motif and the number of genes that have the two motifs in their promoters, with a link to a list of their names In addition,each motif pair is characterized by three numbers: Expression Coherence (EC) score, in six conditions, for the first motif alone, EC score for the second motif alone and, in green, the EC score for the two motifs together
First motif name Second motif name Number of genes with the first motif Number of genes with the second motif Number of genes with the two motifs Cell Cycle Sporulation Diauxic Shift Heat Shock MAPK Signaling DNA damaging agent
RAP1 RPE8 25814123 0.09,0.04,0.25 0.1,0.06,0.32 0.13,0.07,0.36 0.16,0.06,0.61 0.05,0.04,0.15 0.16,0.08,0.4
RAP1 CCA 25835116 0.09,0.05,0.29 0.1,0.06,0.44 0.13,0.06,0.39 0.17,0.06,0.6 0.06,0.04,0.07 0.16,0.09,0.49
RAP1 RPE72 25810224 0.08,0.05,0.32 0.1,0.08,0.47 0.13,0.07,0.43 0.16,0.08,0.5 0.06,0.05,0.1 0.16,0.1,0.43
RAP1 RPE6 2587728 0.08,0.05,0.33 0.1,0.06,0.36 0.12,0.07,0.4 0.14,0.08,0.65 0.05,0.05,0.15 0.15,0.09,0.54
RAP1 RPE69 2589224 0.08,0.05,0.33 0.1,0.06,0.32 0.13,0.08,0.35 0.16,0.08,0.48 0.06,0.04,0.1 0.16,0.11,0.37
RAP1 RPE57 25812223 0.09,0.05,0.34 0.1,0.08,0.41 0.13,0.06,0.45 0.16,0.08,0.52 0.06,0.03,0.11 0.16,0.08,0.59
RAP1 RPE34 2588426 0.08,0.07,0.31 0.1,0.08,0.38 0.13,0.12,0.47 0.16,0.05,0.69 0.05,0.07,0.12 0.16,0.13,0.45
RAP1 phosphate_transport_orfnum2SD_n18 25836726 0.09,0.05,0.16 0.1,0.06,0.2 0.14,0.06,0.21 0.17,0.06,0.42 0.06,0.05,0.06 0.17,0.11,0.26
RAP1 RPE58 2586119 0.09,0.07,0.31 0.1,0.08,0.47 0.13,0.05,0.41 0.16,0.11,0.79 0.05,0.05,0.1 0.16,0.06,0.53
RAP1 PDR 25831818 0.09,0.06,0.26 0.11,0.06,0.18 0.14,0.06,0.17 0.18,0.05,0.27 0.06,0.04,0.08 0.17,0.07,0.28
RPN4 MERE4 18234024 0.07,0.06,0.05 0.08,0.07,0.1 0.07,0.07,0.04 0.08,0.07,0.17 0.05,0.04,0.08 0.32,0.09,0.22
RPN4 nitrogen_and_sulphur_utilization_orfnum2SD_n4 18237118 0.07,0.04,0.04 0.08,0.07,0.08 0.06,0.07,0.1 0.07,0.05,0.2 0.05,0.04,0.05 0.28,0.1,0.44
RPN4 ABF1 18241241 0.08,0.05,0.04 0.08,0.06,0.11 0.06,0.07,0.07 0.07,0.06,0.12 0.05,0.05,0.05 0.28,0.13,0.34
GCN4 BAS1 15137461 0.11,0.06,0.07 0.08,0.07,0.08 0.07,0.06,0.04 0.05,0.05,0.08 0.03,0.04,0.04 0.14,0.11,0.17
MCB SCB 18436322 0.22,0.05,0.19 0.08,0.07,0.16 0.07,0.07,0.11 0.06,0.06,0.09 0.04,0.04,0.12 0.13,0.08,0.1
m_MERE11 STRE 21614924 0.07,0.06,0.08 0.07,0.08,0.04 0.08,0.07,0.11 0.08,0.07,0.31 0.05,0.06,0.12 0.11,0.11,0.22
m_MERE11 SWI5 21636027 0.07,0.04,0.12 0.07,0.06,0.09 0.09,0.06,0.05 0.08,0.06,0.25 0.05,0.04,0.08 0.11,0.09,0.09
HAP234 LFTE17 11636817 0.09,0.06,0.21 0.07,0.06,0.11 0.11,0.06,0.29 0.08,0.06,0.23 0.03,0.05,0.07 0.16,0.1,0.33
HAP234 tricarboxylic-acid_pathway_orfnum2SD_n6 11637615 0.1,0.05,0.11 0.07,0.07,0.11 0.13,0.06,0.16 0.08,0.05,0.33 0.03,0.04,0.07 0.16,0.1,0.32
m_metal_ion_transporters_orfnum2SD_n6 CCA 36935128 0.05,0.05,0.1 0.06,0.06,0.09 0.06,0.07,0.11 0.06,0.06,0.15 0.03,0.04,0.08 0.1,0.09,0.11
MIG1 CSRE 20437024 0.05,0.06,0.05 0.07,0.06,0.11 0.08,0.07,0.07 0.07,0.06,0.13 0.04,0.04,0.04 0.11,0.09,0.13
MIG1 metabolism_of_energy_reserves_orfnum2SD_n30 20430722 0.04,0.05,0.1 0.07,0.06,0.1 0.07,0.06,0.17 0.07,0.05,0.2 0.04,0.04,0.05 0.11,0.09,0.1
MIG1 proteolysis_orfnum2SD_n18 20437739 0.05,0.06,0.06 0.07,0.06,0.08 0.06,0.07,0.11 0.06,0.06,0.13 0.04,0.04,0.07 0.12,0.11,0.08
MIG1 metabolism_of_energy_reserves_orfnum2SD_n29 20437438 0.04,0.05,0.07 0.07,0.07,0.07 0.07,0.06,0.08 0.06,0.05,0.16 0.04,0.04,0.04 0.11,0.09,0.1
MIG1 PDR 20431826 0.04,0.06,0.11 0.07,0.06,0.07 0.07,0.06,0.09 0.07,0.05,0.16 0.04,0.05,0.04 0.11,0.08,0.09
MIG1 SFF' 20438021 0.05,0.06,0.05 0.07,0.08,0.06 0.07,0.06,0.1 0.07,0.05,0.13 0.04,0.04,0.04 0.11,0.08,0.07
MIG1 ALPHA1 20436417 0.05,0.05,0.05 0.07,0.06,0.03 0.08,0.06,0.04 0.08,0.05,0.04 0.04,0.04,0.13 0.11,0.1,0.1
AFT1 SWI5 18936015 0.04,0.04,0.1 0.07,0.06,0.06 0.06,0.05,0.09 0.06,0.06,0.16 0.03,0.04,0.08 0.09,0.09,0.14
m_regulation_of_nitrogen_and_sulphur_utilization_orfnum2SD_n13 CCA 27935120 0.06,0.06,0.05 0.07,0.07,0.04 0.06,0.07,0.05 0.07,0.06,0.22 0.04,0.04,0.09 0.09,0.09,0.07
m_glyoxylate_cycle_orfnum2SD_n7 ABF1 35741219 0.06,0.04,0.05 0.06,0.06,0.05 0.06,0.07,0.07 0.05,0.05,0.18 0.04,0.05,0.05 0.11,0.14,0.16
m_glyoxylate_cycle_orfnum2SD_n7 ALPHA2 35733021 0.05,0.05,0.11 0.06,0.06,0.07 0.06,0.06,0.16 0.05,0.05,0.2 0.04,0.03,0.06 0.11,0.09,0.1
STRE' nitrogen_and_sulphur_metabolism_orfnum2SD_n22 12414720 0.08,0.05,0.11 0.07,0.07,0.02 0.09,0.06,0.11 0.07,0.08,0.29 0.07,0.04,0.17 0.14,0.11,0.15
STRE' STRE 12414939 0.07,0.06,0.12 0.08,0.08,0.05 0.08,0.06,0.12 0.07,0.07,0.17 0.07,0.05,0.1 0.14,0.11,0.14
m_LFTE17 MCM1' 36834128 0.06,0.05,0.1 0.06,0.07,0.06 0.07,0.06,0.07 0.07,0.05,0.19 0.05,0.04,0.04 0.1,0.07,0.12
CCA MERE4 35134039 0.05,0.06,0.06 0.06,0.06,0.09 0.07,0.06,0.08 0.06,0.07,0.12 0.04,0.05,0.05 0.09,0.1,0.11
CCA pentose-phosphate_pathway_orfnum2SD_n5 35136538 0.05,0.05,0.07 0.07,0.07,0.04 0.06,0.06,0.1 0.06,0.06,0.19 0.04,0.04,0.04 0.1,0.09,0.06
CCA cell_death_orfnum2SD_n22 35135641 0.05,0.06,0.06 0.06,0.06,0.07 0.07,0.06,0.09 0.05,0.06,0.13 0.04,0.04,0.07 0.09,0.09,0.08
CCA lysosomal_and_vacuolar_degradation_orfnum2SD_n3 35117515 0.05,0.05,0.01 0.06,0.06,0.1 0.07,0.05,0.03 0.06,0.07,0.03 0.04,0.03,0.16 0.09,0.11,0.09
CCA other_nutritional-response_activities_orfnum2SD_n10 35137432 0.05,0.05,0.08 0.06,0.07,0.06 0.07,0.05,0.06 0.06,0.05,0.13 0.04,0.04,0.05 0.09,0.09,0.09
CCA organization_of_chromosome_structure_orfnum2SD_n12 35119328 0.05,0.06,0.11 0.07,0.07,0.13 0.07,0.07,0.04 0.06,0.05,0.23 0.04,0.04,0.1 0.09,0.09,0.11
m_RRPE RRSE3 38238672 0.06,0.05,0.09 0.09,0.05,0.18 0.13,0.08,0.3 0.13,0.07,0.16 0.07,0.05,0.13 0.12,0.09,0.2
m_RRPE cell_death_orfnum2SD_n16 38235119 0.07,0.06,0.08 0.11,0.07,0.09 0.16,0.07,0.08 0.13,0.07,0.29 0.08,0.04,0.02 0.13,0.09,0.16
m_RRPE metal_ion_transporters_orfnum2SD_n25 38235929 0.07,0.05,0.04 0.1,0.07,0.12 0.16,0.06,0.12 0.13,0.05,0.22 0.08,0.03,0.07 0.13,0.09,0.07
m_RRPE trna_processing_orfnum2SD_n6 38234431 0.07,0.05,0.1 0.1,0.06,0.14 0.16,0.06,0.23 0.13,0.05,0.25 0.08,0.03,0.04 0.13,0.1,0.15
m_RRPE LYS14 38236729 0.07,0.05,0.04 0.1,0.07,0.13 0.15,0.05,0.28 0.14,0.06,0.2 0.08,0.03,0.04 0.13,0.09,0.16
m_RRPE PAC 382367121 0.05,0.06,0.15 0.09,0.09,0.19 0.12,0.16,0.26 0.13,0.14,0.2 0.06,0.1,0.15 0.11,0.14,0.22
m_MERE4 STRE 34014928 0.06,0.06,0.12 0.06,0.07,0.07 0.06,0.07,0.1 0.07,0.08,0.23 0.04,0.05,0.14 0.09,0.11,0.12
m_other_energy_generation_activities_orfnum2SD_n12 ALPHA2' 26719012 0.05,0.05,0.08 0.06,0.06,0.03 0.06,0.05,0.32 0.06,0.07,0.25 0.04,0.04,0.05 0.09,0.08,0.12
CSRE MCM1' 37034130 0.05,0.06,0.05 0.06,0.06,0.1 0.06,0.06,0.06 0.06,0.05,0.14 0.04,0.04,0.05 0.09,0.07,0.08
PHO4 proteolysis_orfnum2SD_n18 18037720 0.04,0.06,0.09 0.07,0.06,0.09 0.05,0.07,0.13 0.05,0.06,0.24 0.04,0.04,0.05 0.11,0.11,0.1
m_deoxyribonucleotide_metabolism_orfnum2SD_n4 MCM1' 17334113 0.04,0.05,0.32 0.05,0.07,0.08 0.08,0.06,0.01 0.07,0.06,0 0.03,0.04,0.08 0.1,0.07,0
m_pheromone_response_generation_orfnum2SD_n4 MCM1' 17234119 0.05,0.05,0.12 0.06,0.07,0.04 0.06,0.06,0.03 0.06,0.06,0.22 0.03,0.04,0.05 0.1,0.07,0.09
m_regulation_of_lipid_fatty-acid_and_isoprenoid_biosynthesis_orfnum2SD_n12.scn m_SFF' 35238028 0.05,0.06,0.08 0.07,0.08,0.09 0.06,0.06,0.07 0.07,0.05,0.15 0.04,0.04,0.04 0.09,0.08,0.06
m_cell_death_orfnum2SD_n22 ALPHA1 35636429 0.05,0.04,0.1 0.06,0.06,0.07 0.06,0.06,0.08 0.06,0.05,0.15 0.05,0.04,0.03 0.09,0.1,0.13
m_tricarboxylic-acid_pathway_orfnum2SD_n6 PAC 37636722 0.05,0.08,0.13 0.07,0.11,0.1 0.06,0.19,0.19 0.05,0.15,0.33 0.04,0.12,0.1 0.1,0.16,0.19
m_organization_of_chromosome_structure_orfnum2SD_n17 SWI5 35836032 0.05,0.04,0.06 0.07,0.06,0.06 0.06,0.06,0.03 0.06,0.06,0.17 0.04,0.04,0.04 0.1,0.09,0.12
m_other_transcription_activities_orfnum2SD_n5 ABF1 21541217 0.07,0.05,0.03 0.07,0.06,0.06 0.07,0.07,0.02 0.05,0.05,0.16 0.05,0.05,0.02 0.09,0.14,0.13
m_c-compound_and_carbohydrate_utilization_orfnum2SD_n9 STRE 14514939 0.06,0.06,0.1 0.08,0.08,0.06 0.06,0.07,0.08 0.09,0.07,0.2 0.05,0.05,0.13 0.11,0.11,0.19
m_nutritional_response_pathway_orfnum2SD_n7 LYS14 36236739 0.05,0.05,0.06 0.06,0.06,0.07 0.05,0.06,0.07 0.06,0.06,0.13 0.04,0.04,0.04 0.11,0.09,0.09
m_anion_transporters_orfnum2SD_n4 ABF1 34341234 0.06,0.05,0.04 0.06,0.06,0.06 0.06,0.07,0.04 0.06,0.05,0.13 0.04,0.05,0.04 0.09,0.14,0.17
m_anion_transporters_orfnum2SD_n15 MCM1 36834540 0.05,0.06,0.08 0.07,0.06,0.06 0.06,0.05,0.06 0.06,0.05,0.12 0.04,0.04,0.05 0.09,0.07,0.1
m_anion_transporters_orfnum2SD_n15 SWI5 36836030 0.05,0.04,0.08 0.07,0.06,0.05 0.06,0.05,0.06 0.06,0.06,0.15 0.04,0.04,0.04 0.09,0.09,0.09
m_ionic_homeostasis_orfnum2SD_n6 ABF1 33841220 0.05,0.05,0.05 0.07,0.06,0.08 0.07,0.07,0.04 0.05,0.05,0.16 0.04,0.04,0.06 0.1,0.14,0.11
m_allantoin_and_allantoate_transporters_orfnum2SD_n18 ABF1 37841225 0.05,0.05,0.08 0.07,0.06,0.02 0.06,0.07,0.06 0.05,0.05,0.18 0.03,0.04,0.04 0.1,0.14,0.18
m_proteolysis_orfnum2SD_n18 STRE 37714942 0.06,0.07,0.08 0.07,0.07,0.06 0.07,0.06,0.09 0.06,0.08,0.23 0.04,0.05,0.09 0.1,0.11,0.13
m_proteolysis_orfnum2SD_n18 SWI5 37736042 0.06,0.04,0.11 0.07,0.06,0.05 0.07,0.05,0.06 0.07,0.06,0.12 0.04,0.04,0.04 0.11,0.09,0.1
STE12 phosphate_utilization_orfnum2SD_n9 24331218 0.05,0.05,0.07 0.06,0.06,0.07 0.07,0.06,0.1 0.06,0.05,0.16 0.04,0.03,0.01 0.1,0.09,0.09
STE12 MCM1' 24334115 0.05,0.06,0.11 0.06,0.06,0.2 0.07,0.05,0.12 0.06,0.06,0.13 0.03,0.04,0.06 0.1,0.07,0.08
m_RRSE3 PAC 386367110 0.05,0.08,0.1 0.06,0.1,0.15 0.07,0.16,0.27 0.07,0.14,0.2 0.04,0.11,0.13 0.09,0.14,0.22
m_mitochondrial_biogenesis_orfnum2SD_n5 SCB 38636328 0.05,0.05,0.05 0.07,0.06,0.09 0.06,0.07,0.09 0.06,0.05,0.12 0.04,0.04,0.11 0.09,0.08,0.14
m_mitochondrial_biogenesis_orfnum2SD_n5 ALPHA1' 38638923 0.05,0.04,0.06 0.07,0.06,0.04 0.06,0.05,0.06 0.06,0.06,0.13 0.04,0.04,0.05 0.09,0.09,0.12
m_other_energy_generation_activities_orfnum2SD_n11 ALPHA2 31833022 0.06,0.05,0.1 0.06,0.06,0.06 0.07,0.06,0.06 0.06,0.04,0.18 0.04,0.03,0.06 0.1,0.09,0.08
m_nitrogen_and_sulphur_metabolism_orfnum2SD_n22 STRE 14714922 0.05,0.07,0.07 0.07,0.08,0.04 0.06,0.07,0.14 0.08,0.08,0.24 0.04,0.06,0.07 0.11,0.12,0.11
m_homeostasis_of_metal_ions_orfnum2SD_n20 SCB 21736322 0.06,0.05,0.1 0.07,0.07,0.02 0.07,0.07,0.05 0.05,0.06,0.16 0.04,0.04,0.05 0.09,0.08,0.07
m_phosphate_utilization_orfnum2SD_n9 MCM1' 31234129 0.05,0.05,0.06 0.06,0.07,0.06 0.06,0.06,0.08 0.05,0.05,0.13 0.03,0.04,0.03 0.09,0.07,0.1
m_phosphate_utilization_orfnum2SD_n9 MCM1 31234525 0.05,0.06,0.09 0.06,0.06,0.06 0.06,0.05,0.09 0.05,0.05,0.18 0.03,0.04,0.07 0.09,0.07,0.09
m_deoxyribonucleotide_metabolism_orfnum2SD_n8 ALPHA2 28633015 0.05,0.05,0.31 0.08,0.05,0.08 0.06,0.06,0.1 0.05,0.05,0 0.04,0.03,0.05 0.1,0.09,0.09
m_amino-acid_transport_orfnum2SD_n18 ABF1 37941227 0.05,0.05,0.04 0.05,0.06,0.08 0.06,0.07,0.02 0.06,0.05,0.16 0.04,0.04,0.05 0.09,0.15,0.1
m_amino-acid_degradation_orfnum2SD_n24 SWI5 26336028 0.06,0.04,0.08 0.06,0.06,0.08 0.07,0.05,0.07 0.06,0.06,0.17 0.04,0.04,0.02 0.09,0.09,0.2
m_pentose-phosphate_pathway_orfnum2SD_n23 STRE 37514915 0.05,0.06,0.11 0.06,0.07,0.08 0.05,0.07,0.16 0.06,0.07,0.22 0.04,0.06,0.16 0.09,0.12,0.16
m_metal_ion_transporters_orfnum2SD_n25 m_BAS1 35937430 0.05,0.06,0.04 0.07,0.07,0.06 0.06,0.05,0.07 0.06,0.05,0.15 0.04,0.04,0.07 0.09,0.11,0.13
m_other_mrna-transcription_activities_orfnum2SD_n20 LYS14 35836726 0.06,0.05,0.07 0.07,0.06,0.05 0.05,0.06,0.03 0.06,0.06,0.21 0.04,0.04,0.03 0.09,0.09,0.07
m_other_mrna-transcription_activities_orfnum2SD_n20 SCB 35836321 0.06,0.05,0.07 0.07,0.07,0.12 0.05,0.07,0.12 0.06,0.05,0.23 0.04,0.04,0.04 0.09,0.08,0.07
m_trna_processing_orfnum2SD_n9 m_BAS1 17437423 0.05,0.06,0.07 0.07,0.06,0.09 0.05,0.05,0.06 0.05,0.05,0.2 0.05,0.04,0.05 0.08,0.12,0.12
m_g-proteins_orfnum2SD_n13 SCB 37336334 0.05,0.05,0.05 0.06,0.07,0.04 0.06,0.07,0.11 0.05,0.05,0.1 0.04,0.04,0.07 0.1,0.08,0.11
m_other_cell_growth_cell_division_and_dna_synthesis_activities_orfnum2SD_n10.scn SCB 37136329 0.05,0.05,0.03 0.06,0.07,0.07 0.05,0.07,0.06 0.05,0.05,0.15 0.04,0.04,0.04 0.1,0.08,0.07
m_other_protein-destination_activities_orfnum2SD_n7 ABF1 37941221 0.07,0.05,0.09 0.07,0.06,0.11 0.09,0.07,0.1 0.06,0.05,0.13 0.05,0.05,0.11 0.12,0.14,0.26
ABF1 SFF 41236527 0.05,0.06,0.07 0.06,0.09,0.05 0.07,0.06,0.05 0.05,0.05,0.11 0.04,0.04,0.05 0.14,0.07,0.13
LYS14 BAS1 36737427 0.05,0.06,0.05 0.06,0.06,0.05 0.06,0.05,0.05 0.06,0.05,0.18 0.04,0.04,0.02 0.08,0.11,0.16
ECB SFF 31736520 0.06,0.06,0.21 0.06,0.09,0.05 0.05,0.06,0.04 0.05,0.05,0.14 0.04,0.04,0.06 0.08,0.08,0.03
ECB SFF' 31738020 0.06,0.06,0.19 0.06,0.08,0.06 0.05,0.06,0.06 0.06,0.05,0.05 0.04,0.04,0.06 0.07,0.08,0.04
SCB SFF 36336528 0.05,0.06,0.06 0.06,0.08,0.16 0.07,0.06,0.08 0.05,0.05,0.16 0.04,0.04,0.03 0.08,0.08,0.1
SCB SFF' 36338044 0.05,0.06,0.06 0.06,0.07,0.16 0.07,0.06,0.11 0.05,0.05,0.1 0.04,0.04,0.04 0.08,0.08,0.07
MCM1' MCM1 341345121 0.05,0.06,0.07 0.07,0.06,0.06 0.06,0.05,0.05 0.05,0.05,0.08 0.04,0.04,0.05 0.08,0.07,0.06
MCM1' SFF 34136516 0.05,0.06,0.18 0.07,0.09,0.07 0.06,0.06,0.04 0.06,0.05,0 0.04,0.04,0.08 0.07,0.08,0.07
MCM1 SFF 34536530 0.05,0.06,0.26 0.06,0.09,0.07 0.05,0.06,0.04 0.05,0.05,0.13 0.04,0.04,0.09 0.07,0.08,0.06
MCM1 SFF' 34538023 0.06,0.06,0.23 0.06,0.08,0.09 0.05,0.06,0.04 0.05,0.05,0.13 0.04,0.04,0.09 0.07,0.08,0.05
SFF' SWI5 38036031 0.06,0.04,0.07 0.08,0.06,0.08 0.06,0.05,0.07 0.05,0.06,0.14 0.04,0.04,0.04 0.08,0.09,0.07