Resequencing analysis for Gene: HELZ

There are 3 sections to this alignment:
  - resequencing alignment (unspliced, by construction)
  - Our alignments (spliced for coding sequence)
  - Alignments of ref. [1] (spliced for coding sequence)

Note that:
  - these alignments should be taken in context with whole protein alignment. Spliced alignments may be interrupted by splicing events.
  - Putative signal of positive selection is shown in blue.

                    .... ....|1... ....|2... ....|3... ....|4... ....|5... ....|6... ....|7... ....|8... ....|9... ....|10.. ....|11.. ....|12.. ....|13.. ....|14.. ....|
reseq__B0_humanX85  --TGGTGTTTGAAGTGGTGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATACG-TGCTGAACTTCG-AAAAAAGA
reseq__B0_humanX73  --TGGTGTTTGAAGTGGTGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAGTAATAACTTGCAGGAG--CG-TGGACTAA
reseq__B0_humanX61  --TGGTGTTTGAAGTGGTGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATACG-TGCTGAACTTCG-AAAAAAGT
reseq__B0_humanX49  ---GGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATACG-TGCTGAACT-CG-AAAAAAGA
reseq__B0_humanX37  ---GGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
reseq__B0_humanX25  -----TGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACT-TC-GGAAA---
reseq__B0_humanX13  ---GGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATACG-TGCCGAACT-CG-AAAAAAGT
reseq__B0_humanX1   --TGGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGCACT-CG-AAAAACCG
reseq__B0_chimpX85  --TGGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-ACACGTTTAG-AATATTCTGCTGAACTTCG-AAAAAAGA
reseq__B0_chimpX73  ----------------------------------------------TGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
reseq__B0_chimpX61  --TGGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTTATCGAAGTGTTTAG-AATA-CGTGCTGAAC--TC-C-------
reseq__B0_chimpX49  -----------------------------------------TGGAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
reseq__B0_chimpX37  TCTGGTGTTTGAAGTG-TGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATACTGTGCTGAACTTCGCAAAAATGA
reseq__B0_chimpX25  -CTGGTGTTTGAAGTGGTGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCTGTATTGGTGTGGTGACTCCATATGACGCCT-GCGCCTTCAG-AATACG-TGCTGAACTTCG-AAAAAAGA
reseq__B0_chimpX13  TTTTGTGTTTGAAGTC-GGGAACGTGTAGAAGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAA---CT-TCGAAAAA
reseq__B0_chimpX1   ----------------------------------TTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCGCA-------
# Our alignments (spliced for proteins)
human_dna           ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
chimp_dna           ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
macaque_dna         ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
# Ref.[1] alignments (spliced for proteins)
ENSP00000351524     ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
ENSPTRP00000016241  ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTCAGGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA
ENSMMUP00000003956  ------------------------------AGAGTTAAGAAGGAAGTGGCCAGTAGCGTGGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGACTCCATATGCTGATC-AAGTGTTTAG-AATA-CGTGCTGAACTTCG-AAAAAAGA

                    15.. ....|16.. ....|17.. ....|18.. ....|19.. .
reseq__B0_humanX85  GATAATCC--------------------------------------
reseq__B0_humanX73  AAT-------------------------------------------
reseq__B0_humanX61  G---------------------------------------------
reseq__B0_humanX49  GATTATCGGAT-----------------------------------
reseq__B0_humanX37  GTTATCCTAA------------------------------------
reseq__B0_humanX25  ----------------------------------------------
reseq__B0_humanX13  GC--------------------------------------------
reseq__B0_humanX1   AG--------------------------------------------
reseq__B0_chimpX85  GATATCTGATGTTG--------------------------------
reseq__B0_chimpX73  GATTATCTGATGTTA-ATGTAGAAAGGGTGGAAATGTTCAATGAAC
reseq__B0_chimpX61  ----------------------------------------------
reseq__B0_chimpX49  GATTATCTGATGTTA-ATGTAGAAAGGGTGT---------------
reseq__B0_chimpX37  GATTATCTTA------------------------------------
reseq__B0_chimpX25  GATTT-----------------------------------------
reseq__B0_chimpX13  CG--------------------------------------------
reseq__B0_chimpX1   ----------------------------------------------
# Our alignments (spliced for proteins)
human_dna           GATTATCTGATGTTA-ATGTA---AGGGTGCTAA------------
chimp_dna           GATTATCTGATGTTA-ATGTA---AGGGTGCTAA------------
macaque_dna         GATTATCTGATGTTA-ATGTA---AGGGTGCTAA------------
# Ref.[1] alignments (spliced for proteins)
ENSP00000351524     GA------GATG-TAGA---A---AGGGTG---A------------
ENSPTRP00000016241  GA------GATG-TAGA---A---AGGGTG---A------------
ENSMMUP00000003956  GA------GATG-TAGA---A---AGGGTG---A------------