risk: 1.5

SCRATCH: outfiles

indivname: indiv1.dat

snpname: snp.dat

genotypename: genodata

badsnpname: badsnps

tlreest: YES

seed: 1011

splittau: YES

fancyxtheta: YES

output: SCRATCH/act.out

trashdir: DIR/junktrashdir

checkit: NO

details: NO

numburn: 10

numiters: 10

simnumindivs: 1000

#casecontrol: 500 200

markersim: 1200

risksim: 2.0

emiter: 10

dotoysim: YES

cleaninit: YES

reestiter: 5

thetafilename: SCRATCH/theta.out

lambdafilename: SCRATCH/lambda.out

freqfilename: SCRATCH/freq.out

indoutfilename: SCRATCH/ind.out

snpoutfilename: SCRATCH/snp.out

ethnicfilename: SCRATCH/ethnic.out

genotoyoutfilename: SCRATCH/genotoy.out

indtoyoutfilename: SCRATCH/indtoy.out