Myosin, etc.
- Our Hypertrophic Cardiomyopathy / Sarcomere Gene
Mutation Database,
with information about
known disease mutations in the human beta-cardiac
myosin heavy chain gene. This is part of NHLBI's
CardioGenomics
project.
- References to standards for mutation
nomenclature and mutation database structure
- Search our FHC Mutation
Database by DNA sequence, to see if your sequence query matches
a known mutated amplimer sequence.
- An
interactive alignment
of five myosin heavy chain protein sequences: human beta-cardiac (with
disease mutations), chicken skeletal, scallop, chicken smooth muscle, and
Dictyostelium. Click on the red mutation residues to display
a 3-D model of the protein with the mutation's position highlighted.
(WARNING: a 350-kB download!)
- A
3D rendering of human beta-cardiac myosin
(created using
Molscript
/
Raster3D
), showing locations
of mutations (discovered in our
lab and others') that cause Familial Hypertrophic
Cardiomyopathy. (73 kB JPEG)
Here are the
script
and the
PDB file
(664 KB) that I used to create the image.
- A page of Molscript color names, sorted by
RGB hex value or
alphabetically by name.
- The same myosin image as above, this time
rendered with RasMol
It's not as pretty, but
RasMol
is interactive, fast, and runs on most platforms.
Here's my
RasMol script
.
-
Alignment in GCG Pileup format
of those myosin sequences which have had their
crystal structures determined: chicken skeletal, scallop,
chicken smooth, and Dictyostelium, with human beta-cardiac
myosin.
- Secondary structure
assignments for chicken skeletal myosin, in an alignment as above
(but not interactive). Edited from a huge
alignment of all known myosin sequences at the
Myosin Home Page at Cambridge University.
- The Familial
Hypertrophic Cardiomyopathy mutation database from
David C.Y. Fung at the
Australian National Genomic Information Service.
- Actin-myosin figures and animations from
Kenneth Holmes's lab, Max Planck Institute.
- Actin-myosin figures and animations
(including an excellent Quicktime/MPEG movie) from
Ron Milligan's lab, Scripps Institute.
-
Willy Wriggers's page
on molecular dynamics simulations of actin, Univ. of
Illinois.
- An animation of an
actin-myosin 3D crossbridge in action
from San Diego State University. (460 kB GIF)
- David Goodsell's "Molecule of the Month" article on myosin at PDB.
Steve DePalma,
depalma @ rascal.med.harvard
http://genetics.med.harvard.edu/~depalma