Department of Genetics

Bacteria


Displaying 1 - 500 of 2807
Contains
Strain Name Sort descending Strain Alias Source Comments Host Host Markers Plasmids Plasmid Markers
pms4
pMS37
psh17-4
dh5a
dh5alpha
dh5a
pLBS27
pLBS27
pMRFW2
rothstein
pGH127
pGH%
pFW217
pRM200
pRM%
ura3 his3
snf1
ura3
%FLAG%
Joel
hml
%hml%
pNOY436
fb2195
phz1
%FB2114%
DB21 RB39 Botstein "ura3-18 on Bam fragment, LEU2 on Sal/Xho " DB6660.... see FB20 pRB39 amp ura3-18 LEU2
FB
FB
fb
FB
FB1 DB6507 Botstein Can screen for URA3 function .......... pyrF74::Tn5 and all HB101 markers none
FB10 SF1032 Froshauer MC4100 genetic background SF1032.... srl::Tn10 reca ara relA lac(del) strR
FB100 B506 Jef Boeke 912 evictant with G418R HB101..... pJEF177 G418R (kanR) URA3 amp
FB1000 PB148 Patty Minehart SalI-RI frag of GLN1 cloned into SmaI of pSLFd178k (480bp) XL1.1..... pPM72 ampR GLN1 promoter (UAS and TATA(2)) CYC1::lacZ
FB1001 PB149 Patty Minehart "same SalI-RI frag as FB1000, but in reverse orientation " XL1.1..... pPM73 ampR GLN1 promoter (UAS and TATA) CYC1::lacZ
FB1002 SL96-33 Patty Minehart SalI-Hinf frag of GLN1 cloned into pSLFd178k (394bp) HB101..... pSL96-33 "ampR GLN1 promoter (UAS only, noTATA)
FB1003 pPM11 Patty Minehart GLN3 disrupted with LEU2 in pBR322. Note: cutting with AatII gives 2 frag o f approx. the same size. HB101..... pPM11 LEU2 ampR ori
FB1004 35BK Patty Minehart "GLN3 disrupted w/ LEU2 (same as in FB1003). AatII frag with Bam linkers on each end, then subcloned into Bam of KS+ plasmid (Bluescript). " HB101..... p35BK LEU2 ampR ori
FB1005 pLGd312s Cindy Keleher see enclosed sheets TB1.1..... pLGd312s see enclosed sheets
FB1006 JK1621 Cindy Keleher see enclosed sheets at FB1005 TB1.1..... pJK1621 see enclosed sheets at FB1005
FB1007 pLGd312-1 Cindy Keleher see enclosed sheets at FB1005 TB1.1..... pLGd312-1 see enclosed sheets at FB1005
FB1008 CK26 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK26 see enclosed sheets at FB1005
FB1009 CK30 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK30 see enclosed sheets at FB1005
FB101 B524 Weinstock et al "see Weinstock et al, PNAS 80, 4432, 4436 " MH1000.... ompB101 pORF1
FB1010 CK24 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK24 see enclosed sheets at FB1005
FB1011 AJ101 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pAJ101 see enclosed sheets at FB1005
FB1012 JK1521 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pJK1521 see enclosed sheets at FB1005
FB1013 CK22 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK22 see enclosed sheets at FB1005
FB1014 CK25 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK25 see enclosed sheets at FB1005
FB1015 pL50 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pL50 see enclosed sheets at FB1005
FB1016 CK23 Cindy Keleher See enclosed sheets at FB1005 TB1.1..... pCK23 see enclosed sheets at FB1005
FB1017 B1497 Truehart pBL101 with BglII(blunt)-BamHI(-542) replacing CYC1 sequences Sma-Bam HB101..... pSB231 ampR URA3 FUS1:lacZ CEN ARS ori
FB1018 B1498 Truehart = FB1017 (pSB231) with 2u HindIII frag from YEp24 replacing cen/ars HindIII frag HB101..... pSB234 ampR URA3 2u FUS1:lacZ
FB1019 pKA1 Karen Arndt SalI frag from YCp701 inserted at SalI site of pUC118. Orientation of inser t is not known. HB101..... pKA1 ampR his4-912d
FB102 B525 Weinstock see above MH1000.... ompB101 pORF2 "see Weinstock et al PNAS 80, 4432-4436
FB1020 pKA2 Karen Arndt SalI frag from YCp701-R5 inserted at SalI site of pUC118. Orientation of in sert is not known. HB101..... pKA2 ampR his4-912dR5
FB1021 pKA3 Karen Arndt SalI frag from YCp701-R58 was inserted at the SalI site of pUC118. Orientat ion of insert is not known. HB101..... pKA3 ampR his4-912dR58
FB1022 pKA5 Karen Arndt SalI site was inserted 18bp upstream of 15-21 ATG by in vitro mutagenesis. T he 1164bp SalI-BamHI frag from mutagenized 2.4kb EcoRI- BamHI frag of 15-2 1 was subcloned into SalI/BamHI cut pSP64 HB101..... pKA5 ampR spt15-21
FB1023 pKA6 Karen Arndt EcoRI-BamHI frag rescued from FW969-1 containing the spt15-122 allele was su jected to oligo directed mut. to introduce a SalI site 18bp upstream of th e 15-122 ATG. The SalI-BamHI frag from the mut. M13 clone was then insert ed into pSP64. HB101..... pKA6 ampR spt15-122
FB1024 pKA7 Karen Arndt SpeI-BamHI frag (1245bp) of pDE32-1 was inserted into pSP64 that had been cu t with XbaI and BamHI. HB101..... pKA7 ampR SPT15+
FB1025 pKA9 Karen Arndt "using oligo-directed mut., an NdeI site was placed at the SPT15 ATG. The 11 43bp NdeI-BamHI frag was inserted into pET3b, a T7 overexpressor plasmid.* *DO NOT GIVE OUT** " BL21(DE3). pLysS (is a plasmid carrying the T7 lysozyme gene =it is CmR). BL21(DE 3) is a lamda lysogen contai pKA9 ampR SPT15+
FB1026 pKA9 Karen Arndt "Using oligo directed mut., an NdeI site was placed at the SPT15 ATG. The 11 43bp NdeI-BamHI frag was inserted into pET3b, a T7 overexpressor plasmid. SEE FB1025!** " HB101.E3). pKA9 ampR SPT15+
FB1027 pKA10/pet Karen Arndt "using oligo-directed mut, an NdeI site was placed at the spt15 ATG. The 114 3bp NdeI-BamHI frag. was inserted into pET3b, a T7 overexpressor plasmid. **SEE FB1025!** " BL21(DE3). pLysS (a plasmid carrying the T7 lysozyme gene; it is CmR) BL21(DE3) is a lmabda lysogen containi pKA10 AmpR spt15-122 CmR
FB1028 pKA10 Karen Arndt "using oligo-directed mut. an NdeI site was placed at the spt15 ATG. The 114 3bp frag was inserted into pET3b, a T7 overexpressor plasmid. **SEE FB1027 !** " HB101.E3). pKA10 AmpR spt15-122
FB1029 pKA11 Karen Arndt "using oligo-directed mut. an NdeI site was placed at the spt15 ATG. The 114 3bp NdeI-BamHI frag was inserted into pET3b, a T7 overexpressor plasmid. **SEE FB1025!** " BL21(DE3). pLysS (a plasmid carrying the T7 lysozyme gene; it is CmR) BL21(DE3) is a lambda lysogen containi pKA11 AmpR spt15-21 CmR
FB103 B570 Giora Simchen RI partial evictant oflys2-173 with pSL42-2 HB101?.... pGS49 amp URA3 lys2-173
FB1030 pKA11 Karen Arndt "using oligo-directed mut. an NdeI site was placed at the spt15 ATG. The 114 3bp Nde-BamHI frag was inserted into pET3b, a T7 overexpressor plasmid. * *SEE FB1029!** " HB101.E3). pKA11 AmpR spt15-21
FB1031 pKA12 Karen Arndt The 2.4kb EcoRI-BamHI frag from pDE73-21 was cloned into pFW4 cut with EcoRI and BamHI HB101.E3). pKA12 AmpR URA3 SPT15
FB1032 pKA13 Karen Arndt ~6.6kb ClaI-SacI insert rescued from FW969 was cloned into pRS306. The ClaI -SacI insert contains the spt15-122 allele. HB101.E3). pKA13 AmpR URA3 spt15-122 (integrating)
FB1033 pKA14 Karen Arndt "spt15-301= L114F, it was introduced by site-directed mut. into the SalI-XbaI frag of pKA4, which was then introduced into pKA12/SalI-XbaI. " HB101..... pKA14 AmpR URA3 spt15-301 (L114F)
FB1034 pKA15 Karen Arndt "spt15-302= G119V, it was introduced by oligo-directed mut into pKA4 SalI-Xba I frag, which was subcloned into pKA12. " HB101..... pKA15 AmpR URA3 spt15-302 (G119V)
FB1035 pKA16 Karen Arndt "spt15-303= L205A, it was subcloned into pKA12 as XbaI-BamHI frag " HB101..... pKA16 AmpR URA3 spt15-303 (L205A)
FB1036 pKA17 Karen Arndt "spt15-304= L205I, it was created by oligo-directed mut. and was introduced i nto pKA12 as XbaI-BamHI frag. " HB101..... pKA17 AmpR URA3 spt15-304 (L205I)
FB1037 pKA18 Karen Arndt "spt15-305= L205K, it was made by oligo-directed mut. in M13 and was subclone d into pKA12 as XbaI-BamHI frag. " HB101..... pKA18 AmpR URA3 spt15-305 (L205K)
FB1038 pKA19 Karen Arndt spt15-306= G210V is subcloned into pKA12 as XbaI-BamHI frag. HB101..... pKA19 AmpR URA3 spt15-306 (G210V)
FB1039 pKA20 Karen Arndt spt15-307= L205F (spt15-122) and F207L. F207L was introduced into the spt15 -122 gene to make a double mut.; the mutagenized XbaI-BamHI frag from spt1 5-122 was then subcloned into pKA12. HB101..... pKA20 "AmpR URA3 spt15-307 (L205F, F207L)
FB104 B577 Giora Simchen eviction of lys2-128delta R3 HB101?.... pGS64 amp URA3 lys2-128deltaR3
FB1040 pKA21 Karen Arndt XbaI-BamHI frag fron spt15-122 was subcloned into pKA12 tp replace the wild type XbaI-BamHI frag. spt15-122= L205F. HB101..... pKA21 AmpR URA3 spt15-122
FB1041 pKA22 Karen Arndt spt15-308= L114F and L205F. The spt15-122 (L205F) XbaI-BamHI frag was subcl oned into pKA14 (contains spt15-301=L114F) to replace its XbaI-BamHI sec. pKA22 carries double L to F mutations in the repeats of the SPT15 gene. HB101..... pKA22 "AmpR URA3 spt15-308 (L114F, L205F)
FB1042 pKA23 Karen Arndt 2.2kb XbaI-HindIII frag containing LEU2 from pDE48-1 was inserted into pKA12 SpeI-HindIII to replace almost the entire SPT15 reading frame with LEU2.( =spt15 null). HB101..... pKA23 AmpR URA3 spt15-102dLEU2
FB1043 pKA24 Ricupero/Arndt "spt15-309= L114A, it was made by oligo directed mut of SalI-XbaI frag of pKA 4, it was then inserted into pKA12 as the SalI-XbaI frag. " HB101..... pKA24 AmpR URA3 spt15-309 (L114A)
FB1044 pKA25 Ricupero/Arndt "spt15-310= L114A, it was introduced by oligo-directed mut. into SalI-XbaI fr ag of pKA4; SalI-XbaI frag was then cloned into pKA12 to replace wt sequen ces. " HB101..... pKA25 AmpR URA3 spt15-310 (L114A)
FB1045 pKA26 Ricupero/Arndt spt15-311= L114K; it was made by oligo-directed mut. of pKA4 SalI-XbaI frag in M13MP18; the mutagenized SalI-XbaI frag was then cloned into pKA12 to r eplace wt seq. HB101..... pKA26 AmpR URA3 spt15-311 (L114K)
FB1046 pKA27 Ricupero/Arndt spt15-312= G119P; was made by oligo-directed mut. of pKA4 SalI-XbaI frag in M13mp18; the mutagenized frag was inserted as a SalI-XbaI piece into pKA12 to replace wt seq. HB101..... pKA27 AmpR URA3 spt15-312 (G119P)
FB1047 pKA28 Ricupero/Arndt spt15-313= K127A; it was made by oligo-directed mut. of pKA4 SalI-XbaI frag in M13mp18;the mutagenized SalI-XbaI frag was then subcloned into pKA12 to replace wt sequences. HB101..... pKA28 AmpR URA3 spt15-313 (K127A)
FB1048 pKA29 Ricupero/Arndt spt15-314= K127R; it was made by oligo-directed mut of pKA4 SalI-XbaI frag i n M13mp18; the mutagenized SalI-XbaI frag was then subcloned into pKA12 to replace the wt seq. HB101..... pKA29 AmpR URA3 spt15-314 (K127R)
FB1049 pKA30 Ricupero/Arndt "spt15-315= L205D; it was made by oligo-directed mut. of XbaI-BamHI frag of p KA4, it was then inserted into pKA12 as the XbaI-BamHI frag to replace wt seq. " HB101..... pKA30 AmpR URA3 spt15-315 (L205D)
FB105 B620 Collaborative GAL UAS on 0.75 kb fragment; does NOT contain the GAL +1 of transcription .B101?.... CGE258 amp URA3 2 micron GAL UAS
FB1050 pKA31 Ricupero/Arndt spt15-316= G210P; it was made by oligo-directed mut. of pKA4 XbaI-BamHI frag in M13mp18; the mutagenized frag was then inserted as the XbaI-BamHIfrag of pKA12 to replace wt seq. HB101..... pKA31 AmpR URA3 spt15-316 (G210P)
FB1051 pKA32 Ricupero/Arndt spt15-317= K218A; it was made by oligo-directed mut of pKA4 XbaI-BamHI frag in M13mp18; the mutagenized frag was then cloned onto pKA12 as the XbaI-Ba mHI frag to replace wt seq. HB101..... pKA32 AmpR URA3 spt15-317 (K218A)
FB1052 pKA33 Ricupero/Arndt spt15-318= K218R; it was made by oligo-directed mut of pKA4 Xba-BamHI frag i n M13mp18; the mutagenized frag was then subcloned into pKA12 to replace w t seq. HB101..... pKA33 AmpR URA3 spt15-318 (K218R)
FB1053 pCC11 Christy ~6kb Bgl-Bgl frag from pCC27 cloned into Bam site of YCp50. SPT6+ is in ori entation I. HB101..... pCC11 AmpR CEN ARS URA3 SPT6+
FB1054 pSIN1 W. Kruger pSIN1 has SIN1/SPT2 on a 2.7kb RI-SphI fraf cloned into pMR366. (pMR366 is identical to YCp50 except the pBR322 origin has been replaced with pSC101' s thereby making DNA yeilds low. MH6....... pSIN1 SIN1/SPT2 AmpR URA3 CEN ARS
FB1055 pSZ26 Szostak/Wu REF: Plasmid 2:536-554 Szostak and Wu HB101..... pSZ26 AmpR rDNA-BglII-A
FB1056 pSPORT1 Gibco/BRL Clonig vector HB101..... pSPORT1 AmpR see insert
FB1057 pKK5-1 Brosius . "=plasmid for making RNA markers with E.coli RNA polymerase. Ref: Gene (1984 ) 27, p. 161-172 " HB101..... pKK5-1 AmpR
FB1058 pKK34-121 Brosius . "plamid for making RNA markers wiht E. coli RNA polymerase. Ref: MGG (1985) 199, p. 55-58 " HB101..... pKK34-121 AmpR
FB1059 pGAL4CG- Lue plasmid for yeast in vitro transcription. REF: Science 246 : 661 (1989) Lue et al. HB101..... pGAL4CG- AmpR
FB106 B621 Collaborative "GAL UAS on 0.75 kb fragment, Xho cloning site " ?......... GAL UAS URA3 amp
FB1060 pJR201 J. Rooney see notebook. HB101..... pJR201 spt15-201 AmpR CEN ARS TRP1
FB1061 pJR202 J. Rooney see notebook. HB101..... pJR202 spt15-202 AmpR TRP1 CEN ARS
FB1062 pJR203 J. Rooney see notebook. HB101..... pJR203 spt15-203 AmpR TRP1 CEN ARS
FB1063 pJR204 J. Rooney see notebook. HB101..... pJR204 spt15-204 AmpR TRP1 CEN ARS
FB1064 pJR205 J. Rooney SEE NOTEBOOK HB101..... pJR205 spt15-205 AMPR CEN ARS TRP1
FB1065 pJR206 J. Rooney SEE NOTEBOOK HB101..... pJR206 spt15-206 AmpR TRP1 CEN ARS
FB1066 pJR207 J. Rooney SEE NOTEBOOK HB101..... pJR207 spt15-207 AmpR TRP1 CEN ARS
FB1067 pJR208 J. Rooney SEE NOTEBOOK HB101..... pJR208 spt15-208 AmpR TRP1 CEN ARS
FB1068 pJR209 J. Rooney SEE NOTEBOOK HB101..... pJR209 spt15-209 AmpR TRP1 CEN ARS
FB1069 pJR210 J. Rooney SEE NOTEBOOK HB101..... pJR210 spt15-210 AmpR TRP1 CEN ARS
FB107 B622 Collaborative GAL UAS with Sal cloning site ?......... "GAL UAS, URA amp 2 micron
FB1070 pJR211 J. Rooney SEE NOTEBOOK HB101..... pJR211 spt15-211 AmpR TRP1 CEN ARS
FB1071 pJR212 J. Rooney SEE NOTEBOOK HB101..... pJR212 spt15-212 AmpR TRP1 CEN ARS
FB1072 pJR213 J. Rooney SEE NOTEBOOK HB101..... pJR213 spt15-213 AmpR TRP1 CEN ARS
FB1073 pRS104 R. Simpson See notebook for information in insert. HB101..... pRS104 ARS AmpR
FB1074 pRS109 R. Simpson see notebook for information in insert. HB101..... pRS109 REP3 AmpR
FB1075 CP32 C. Peterson =BglII-SmaI frag of SWI3 in YIp5 (for making Southern probe). See letter in notebook. unknown... CP32 SWI3 URA3 AmpR
FB1076 CP34 C. Peterson is in YEp24. SWI2 (SNF2) disruption allele was created by replacing the lg. BglII frag with HIS3 gene. See letter in notebook for information. unknown... CP34 swi2d::HIS3 AmpR URA3 2micron ori
FB1077 CP59 C. Peterson see letter in notebook for information. unknown... CP59 swi3d::TRP1 AmpR URA3
FB1078 BD39 C. Peterson "is in YIp5. swi1::LEU2 allele was constructed by replacing BamHI/BglII dele tion of SWI1 with LEU2. Digest with PstI, isolate ~1kb frag for one-step d isruption of SWI1. See notebook for letter. " HB101.n... BD39 swi1d::LEU2 AmpR URA3
FB1079 pDAD1 Pellman/Fink See notebook for more info. and polylinker sequence HB101..... pDAD1 AmpR URA3 2micron Gal10' promoter
FB108 B625 D. Schild via Fink Current Genetics 7: 85-92 JA300..... thr leuB6 thi thyA trpC117 shmK- hsrK- strR pSM21 rad52::TRP1 amp
FB1080 pDAD2 Pellman/Fink See notebook for more info. and polylinker sequence. HB101..... pDAD2 AmpR URA3 2micron GAL10' promoter
FB1081 pLR1 L. Rosen "from FB759 (pRB759), URA3 SacI frag cloned into SacI site of FB659 (pRS314) that had its PpuMI site filled in. See FB1082 (pLR2). " HB101..... pLR1 AmpR TRP1 URA3 CEN ARS
FB1082 pLR2 L. Rosen #NAME? HB101..... pLR2 AmpR TRP1 CEN ARS
FB1083 pGBT9 Stan Fields see notebook HB101..... pGBT9 TRP1 AmpR Gal4 (1-147)
FB1084 pMFH1 D. Gottschling REF: MCB vol 5 No 4M Apr85 p.610-618. See notebook HB101..... pMFH1 LEU2 URA3 AmpR 2micron DAM
FB1085 pDP6+DAM D. Gottschling REF: MCB vol5 No4 Hoekstra + Malone 1985 p.610-618 MCB vol6 No10 Hoekstra + Malone 1986 p.3555-3558. See sheets in notebook. HB101..... pDP6+DAM LYS2 DAM AmpR
FB1086 pRR46 D. Gottschling REF: MCB 7:1012 HB101..... pRR46 rad1::LEU2
FB1087 BM1541 Mark Johnston to cut out GAL4 use either BamHI + HindIII or BamHI + EcoRI; the entire gen e including its promoter is in these frags. See sheets in notebook. unknown... pBM1541 AmpR TRP1 CEN ARS GAL4
FB1088 pJR303 J. Rooney RI-Bam frag of spt15-203 colned into YIp5 vector as its Bam/RI frag. HB101.n... pJR303 URA3 AmpR spt15-203
FB1089 pJR305 J. Rooney Bam/RI frag containing spt15-205 cloned into YIp5 vector as its Bam/RI frag. HB101.n... pJR305 AmpR URA3 spt15-205
FB109 B626 D. Schild via Fink see FB108 JA300..... see 108 ? rad52::LEU2
FB1090 pJR307 J. Rooney Bam/RI frag containing spt15-207 was cloned into YIp5 vector as its Bam/RI f rag. HB101.n... pJR307 AmpR URA3 spt15-207
FB1091 pJR309 J. Rooney Bam/RI frag containing spt15-209 was cloned into YIp5 vector as its Bam/RI f rag/ HB101.n... pJR309 AmpR URA3 spt15-209
FB1092 pJR311 J. Rooney Bam/RI frag containing spt15-211 was cloned into YIp5 vector as its Bam/RI f rag. HB101.n... pJR311 AmpR URA3 spt15-211
FB1093 pJR312 J. Rooney Bam/RI frag containing spt15-212 was cloned into YIp5 vector as its Bam/RI f rag. HB101.n... pJR312 AmpR URA3 spt15-212
FB1094 BDE115 D. Eisenmann =BDE115 in Dave's collection. HB101..... pDE40-4 SPT15 AmpR TRP1 CEN ARS
FB1095 WB101 Craig Peterson plasmid is in a YCp50 vector unknown... pWB101 URA3 AmpR HHT2 HHF2 CEN ARS
FB1096 pM883 David Stillman ***DO NOT GIVE OUT!!!*** (see sheet) pM883= SIN3 in YCp50. HB101.n... pM883 SIN3 URA3 AmpR CEN ARS
FB1097 pM1387 David Stillman ***DO NOT GIVE OUT!!!*** (see enclosed sheet) pM1387= SIN4 in pRS316 HB101.n... pM1387 SIN4 URA3 AmpR CEN ARS
FB1098 BBM11 Betsy Malone Sal-Xho of LEU2 in YEp13 inserted into Sal site of pBM8 HB101..... pBM11 spt16-102::LEU2 AmpR URA3
FB1099 BBM22 Betsy Malone Bam frag of spt16-102::LEU2 from pBM11 (FB1098) into Bam site of YEp24 HB101..... pBM22 spt16-102::LEU2 AmpR URA3 TetS 2micron ori
FB11 none Winston insert is 5.3 kb B28.32.... trp B1 his (P2 eductant) pFW1 "E. coli hisOGD H3 in YIp5, amp
FB110 B636 D. Schild via Fink see Current Genetics 7:85-92. HB101..... YEp13-RAD52 RAD52 LEU2 2 micron amp
FB1100 BBM23 Betsy Malone H3-Sal frag of SPT16 (from pBM7) put into pBR322.****This frag is probably N ONfunctional---it was made as a NORTHERN PROBE**** HB101..... pBM23 SPT16 frag AmpR TetS ori
FB1101 BBM25 Betsy Malone ScaI-H3 frag of SPT4 into H3-NruI site of YCp50 HB101..... pBM25 SPT4 AmpR URA3 CEN ARS
FB1102 BBM26 Betsy Malone RI-PvuII of SPT4 into RI-SmaI of YEp355 ***makes an in frame SPT4-lacZ fusio n HB101..... pBM26 SPT4-lacZ AmpR URA3 2micron
FB1103 BBM27 Betsy Malone RI-H3 frag of SPT4 into RI-H3 of pUC19 HB101..... pBM27 SPT4 AmpR ori
FB1104 BBM33 Betsy Malone spt16-23 Bam frag into pRS314 (= a derivative of pBM13) Yeast strain=L722 a lias BM101 HB101..... pBM33 spt16-23 AmpR TRP1 CEN ARS ori
FB1105 BBM34 Betsy Malone spt16-35 Bam frag into pRS314 (=a derivative of pBM13) Yeast strain= L723 a lias BM102 HB101..... pBM34 spt16-35 AmpR TRP1 CEN ARS ori
FB1106 BBM35 Betsy Malone spt16-99 Bam Frag into pRS314 (=a derivative of pBM13) Yeast strain= L724 a lias BM103 HB101..... pBM35 spt16-99 AmpR TRP1 CEN ARS ori
FB1107 BBM37 Betsy Malone spt16-133 Bam frag into pRS314 (=a derivative of pBM13) Yeast strain= L725 alias BM124 HB101..... pBM37 spt16-133 AmpR TRP1 CEN ARS ori
FB1108 BBM39 Betsy Malone spt16-146 Bam frag into pRS314 (=a derivative of pBM13) Yeast strain= L726 alias BM126 HB101..... pBM39 spt16-146 AmpR TRP1 CEN ARS ori
FB1109 BBM42 Betsy Malone spt16-175 Bam frag into pRS314 (=a derivative of pBM13) Yeast strain= L727 alias BM129 HB101..... pBM42 spt16-175 AmpR TRP1 CEN ARS ori
FB111 B638 D. Schild via Fink see Current Genetics 7:85-92 JA300..... see FB108 pSM13
FB1110 BBM44 Betsy Malone spt16-181 Bam frag into pRS314 (=a derivative of pBM13) Yeast strain= L728 alias BM131 HB101..... pBM44 spt16-181 AmpR TRP1 CEN ARS ori
FB1111 BBM45 Betsy Malone spt16-185 Bam frag in pRS314 (= a derivative of pBM13) Yeast strain= L729 alias BM132 HB101..... pBM45 spt16-185 AmpR TRP1 CEN ARS ori
FB1112 BBM46 Betsy Malone spt16-197 Bam frag in pRS314 (= a derivative of pBM13) Yeast strain= L730 a lias BM133 HB101..... pBM46 spt16-197 AmpR TRP1 CEN ARS ori
FB1113 BBM47 Betsy Malone SPT4 with Amino acid #7 changed fron Cys to Ser. (in vitro mutagen. of M13 clone 106 with primer BM32. H3 frag subcloned into YCp50) HB101..... pBM47 spt4 (Cys7 to Ser) URA3 AmpR CEN ARS
FB1114 BBM49 Betsy Malone SPT4 with amino acid #7 changed from Cys to His---Has opp orientation as tha t of pBM48. (From in vitro mut. fo M13 clone 106 with primerBM33. H3 fra g subcloned into YCp50.) HB101..... pBM49 spt4 (Cys7 to His) URA3 CEN ARS AmpR
FB1115 BBM50 Betsy Malone SPT4 with amino acid #27 changed from Cys to Ser. (from in vitro mut. of M1 3 clone 106 with primer BM34. H3 frag subcloned into YCp50. HB101..... pBM50 spt4 (Cys27 to Ser) AmpR URA3 CEN ARS
FB1116 BBM51 Betsy Malone from gap repair of pJF42 in L331 HB101..... pBM51 spt4-289 AmpR URA3 CEN ARS
FB1117 BBM52 Betsy Malone from gap repair of pJF42 in L351 HB101..... pBM52 spt4-3 AmpR URA3 CEN ARS
FB1118 BBM53 Betsy Malone from gap repair of pJF42 in L374 HB101..... pBM53 spt4-6 AmpR URA3 CEN ARS
FB1119 BBM56 Betsy Malone NOTE: lerner fusion to the N terminus of SPT4. (from oligo dir. mut. of M13 clone 106 with BM28; H3 frag subcloned into YCp50.) HB101..... pBM56 lerner::SPT4 AmpR URA3 CEN ARS
FB112 HB101 via Fink B324 in GR Fink collection .A300..... thr leu pro B1 supE44 r- m- recA
FB1120 BBM57 Betsy Malone NOTE: lerner fusion to C terminus of SPT4 (from oligo dir mut. of M13 clone 106 with BM29; H3 frag was subcloned into YCp50. HB101..... pBM57 SPT4::lerner AmpR URA3 CEN ARS
FB1121 BBM61 Betsy Malone SPT4 with amino acid #27 changed from Cys to His. (from oligo dir mut. of M1 3 clone 106 with BM35; H3 frag subcloned into YCp50) HB101..... pBM61 spt4 (Cys27 to His) AmpR URA3 CEN ARS
FB1122 BBM65 Betsy Malone NOTE: lerner fusion to the N terminus of SPT4 (H3 frag from mut7C cloned in to H3 site of pCGS42) HB101 .... pBM65 lerner::SPT4 AmpR ori URA3 2micron
FB1123 BBM66 Betsy Malone NOTE: lerner fusion to the C terminus of SPT4 (H3 frag from mut88 cloned int o H3 site of pCGS42.) HB101..... pBM66 SPT4::lerner AmpR URA3 2micron ori
FB1124 BBM68 Betsy Malone insert SPT5 (H3 to KpnI) into YIp356R (Has partial SPT5 function; blue in coli and yeast) E. coli strain is SICK. TB1.1..... pBM68 SPT5-lacZ (H3 to KpnI) AmpR URA3
FB1125 BBM72 Betsy Malone NOTE: lerner fusion to the N terminus of SPT4 (H3 frag from FB1122 [pBM65] cloned into H3 sites of YEp13.) HB101..... pBM72 SPT4::lerner AmpR LEU2 2micron TetR
FB1126 BBM76 Betsy Malone NOTE: =Orientation II. (H3 frag from mut13C into pCGS42) HB101..... pBM76 HAI::spt4 (Cys7 to Ser) URA3 2micron AmpR
FB1127 BBM77 Betsy Malone NOTE: = Orientation I. (H3 frag from mut14C into pCGS42.) HB101..... pBM77 HAI::spt4 (Cys7 to His) URA3 2micron AmpR
FB1128 BBM79 Betsy Malone NOTE: = Orientation I (H3 frag from mut15A cloned into pCGS42.) HB101..... pBM79 HAI::spt4 (Cys27 to Ser) URA3 2micron AmpR
FB1129 BBM80 Betsy Malone NOTE: = Orientaion I (H3 frag from mut16B into pCGS42.) HB101..... pBM80 HAI::spt4 (Cys27 to His) URA3 AmpR 2micron
FB113 B522 Silhavy "PNAS 80,4432 " MH3000.... "araD139 del(ara,leu)7697 del(lac)X74 galU galK rpsL (strR) ompR101
FB1130 BBM83 Betsy Malone NOTE: = Orientation II (H3 frag from mut18B into pCGS42.) HB101..... pBM83 HAI::spt4 (Cys24 to His) URA3 AmpR 2micron
FB1131 BBM84 Betsy Malone NOTE: =Orientation II (H3 frag from mut19B into pCGS42.) HB101..... pBM84 HAI::spt4 (Cys24; 27 to His) URA3 AmpR 2micron
FB1132 BBM89 Betsy Malone NOTE: = Orientation I (H3 frag from mut17C into pCGS42.) HB101..... pBM89 HAI::spt4 (Cys24 to Ser) URA3 AmpR 2micron
FB1133 pHB51 Henry Baker U. Fla TPI1= triose phosphate isomerase. H3-H3 frag with TPI1 (~4.4kb) in pUC18. HB101..... pHB51 AmpR TPI1
FB1134 pHB59 Henry Baker U. Fla. TPI1= triose phosphate isomerase. H3-SphI frag of TPI1 into pUC18. HB101..... pHB59 AmpR TPI1
FB1135 pMS39 Michele Swanson from a 7kb H3-EagI frag containing HAI-SPT6 ligated to pRS315 at H3+EagI TB1....... pMS39 HAI-SPT6 LEU2 CEN AmpR ARS
FB1136 EB153 M. Tyers + E. Elion GAL1-CLN3-1 (dominant mutation) fusion HB101..... pCGS-CLN3-1 AmpR URA3 2u GAL1::CLN3-1 fusion
FB1137 EB154 M. Tyers + E. Elion GAL-CLN3 fusion HB101..... pCGS-CLN3 AmpR URA3 2u GAL1::CLN3 fusion
FB1138 EB142 E. Elion fus3d6::LEU2= XmnI deletion XhoI deletion with LEU2 in Xho site. To integra te cut with NheI and HindIII unknown... pYEE98 AmpR fus3d6::LEU2
FB1139 Chris Clark 4.3kb BamHI frag containing SPT16 cloned into BamHI site of YEp24 HB101..... pCC48 SPT16 2u URA3 ampR tetS
FB114 B523 Silhavy TK1046.... araD139 del(argF-lac)U169 rpsL150(strR) relA1 flbB5301 deoC1 ptsF25 ma lPQ::Tn5 ompBcs1
FB1140 A. Rowley + Curt Wittenburg HB101.....
FB1141 pMAL-c NEB for making fusions to MBP (maltose binding protein) encoded by malE to ove rexpress proteins in E. coli HB101..... pMAL-c AmpR
FB1142 pMAL-p NEB for making fusions to MBP (maltose binding protein) encoded by malE to o verexpress proteins in E. coli HB101..... pMAL-p AmpR
FB1143 pMAL-cRI NEB for making fusions to MBP (maltose binding protein) encoded by malE To ove rexpress protein in E. coli HB101..... pMAL-cRI AmpR
FB1144 pGN801 G. Natsoulis + J. Boeke See Genetics 123:269 unknown... pGN801-ura3-153d ura3-153d TRP1 CEN AmpR
FB1145 pFC101.1 Cross via Elion contains 6kb of yeast DNA that includes DAF1-1. It was in YCp50- but Fred C ross deleted CEN. unknown... pFC101.1 DAF1-1 (=CLN3?) URA3 ampR
FB1146 p810 Reed via Elion YRp7 with a HindIII-SalI frag (4kb) containing the rest of CLN2 disrupted by LEU2 unknown... p810 cln2::LEU2 ampR TRP1 ARS1
FB1147 p419 Reed via Elion YEp13 with a 3kb EcoRI frag containing most of CLN1 with a TRP1 insertion unknown... p419 cln1::TRP1 (weak trp+) LEU2 2micron ampR
FB1148 pPT1 Patrick Tan ***Tagged SPT7*** TB1....... pPT1 SPT7-HAI LEU2 CEN ARS ampR
FB1149 pPT4 Patrick Tan Same as FB1148 but 56a.a. repeat sequence deleted by oligo directed mut. TB1....... pPT4 SPT7 LEU2 CEN ARS ampR
FB115 ? D. Hanahan high frequency transformer ?.1046.... ? none
FB1150 pPT3 Patrick Tan ***UNtagged SPT7*** TB1....... pPT3 SPT7 LEU2 CEN ARS ampR
FB1151 pPT2 Patrick Tan ***tagged SPT7 in dam- strain*** see also FB1148 MM572..... dam- See FB274 pPT2 SPT7-HAI LEU2 CEN ARS ampR
FB1152 pCC58 Chris Clark 4.6kb SPT16 BamHI frag cloned into BamHI site of YCp50 (orientation A) HB101..... pCC58 SPT16 URA3 ampR tetS
FB1153 pCC61 Chris Clark 5.7kb SalI frag containing HTA1-HTB1 cloned into SalI site of YEp24. HB101..... pCC61 HTA1-HTB1 URA3 ampR 2micron
FB1154 pCC64 Chris Clark ~6.7kb HindIII frag containing HHT1-HHF1 cloned into HindIII site of pCGS42. HB101..... pCC64 HHT1-HHF1 2micron URA3 ampR
FB1155 pCC66 Chris Clark 2.6kb HindIII frag w/ HHT2 + 1.48 HindIII frag w/ HHF2 both cloned into Hind III site of pCGS42. HB101..... pCC66 HHT2-HHF2 URA3 2micron ampR tetR
FB1156 pCC67 Chris Clark 6.4kb HTA1-HTB1 Bam frag + 5.4kb HHT1-HHF1 Bam-H3 frag were cloned into the H3 and Bam sites of pCGS42. HB101..... pCC67 HHT1-HHF1 HTA1-HTB1 2micron URA3 ampR
FB1157 pDE92-4 D. Eisenmann = high copy spt15-21 with SalI site HB101..... pDE92-4 spt15-21 2micron TRP1 ampR
FB1158 pDE93-6 D. Eisenmann #NAME? HB101..... pDE93-6 SPT15 2micron TRP1 ampR
FB1159 pDE105-6 D. Eisenmann **used for gapped rescue of SPT3 alleles by cutting with MluI and XhoI** HB101..... pDE105-6 SPT3 URA3 CEN ARS ampR
FB116 K38 K38.46.... HfrC
FB1160 pDE118-4 D. Eisenmann SPT3 cloned into M13 + mut to insert an NdeI site at the ATG. This frag (RI -H3) was cloned into pRS426. **has SPT3+ activity** HB101..... pDE118-4 SPT3 with NdeI site at ATG 2micron URA3 ampR
FB1161 pDE119-1 D. Eisenmann SPT3 mut in M13 to attach 9 a.a. Lerner epitope at SPT3 N terminal. An RI-H 3 frag containing this was cloned into pRS426. **has SPT3+ activity + epit ope tag IN VIVO** HB101..... pDE119-1 SPT3 with Lerner epitope at NT URA3 2micron ampR
FB1162 pDE120-4 D. Eisenmann see FB1161 *** Lerner tagged SPT3 C terminal*** has SPT3+ activity but tag is not seen by Western HB101..... pDE120-4 SPT3 with Lerner epitope at CT 2micron URA3 ampR
FB1163 pDE133-12 D. Eisenmann ***Lerner tagged spt3-401*** HB101..... pDE133-12 spt3-401 with Lerner epitope at NT 2micron URA3 ampR
FB1164 pMR79 Mark Rose .n #NAME? HB101..... pMR79 URA3 CEN ARS ampR
FB1165 L15/pUN45 S. Buratowski SPT15 with Lerner at N terminal in vector pUN45 (Elledge + Davis) HB101..... L15/pUN45 SPT15 with Lerner epitope at NT TRP1 CEN ARS ampR
FB1166 L15/pUN55 S. Buratowski spt15 with Lerner at N terminal in vector pUN55 HB101..... L15/pUN55 SPT15 with Lerner epitope at NT URA3 CEN ARS ampR
FB1167 pGP26 Greg Prelich BglII spt6-140 genomic frag in BamHI site of YCp50. HB101..... pGP26 spt6-140 ampR URA3 CEN ARS
FB1168 pAB56 A. Bortvin BglII spt6-140 frag cloned into BamHI site of YCp50 that has BglII-SmaI frag (CEN ARS) deleted. see also FB1167. HB101..... pAB56 spt6-140 URA3 ampR
FB1169 pAB1 A. Bortvin 3.5kb SPT5 frag from pMS4 cloned into SmaI site of pJK1521. LexA-SPT5 fusio n= 12-1064 a.a. HB101..... sick pAB1 SPT5-lexA TRP1 CEN ARS ampR
FB117 JM101 via Fink This is strain B234 in the G.R. Fink collection JM101..... del(lac-pro) supE thi/ F'traD36 proAB lacIq none
FB1170 pAB57 A. Bortvin same as FB1169 but fusion of lexA with SPT5 starting at a.a.#632-1064. HB101..... sick pAB57 SPT5-lexA TRP1 CEN ARS ampR
FB1171 pCC74 Chris Clark URA3 HindIII frag cloned into the trt1 deletion site in pCC72. Note: URA3 o rientation #1. FB1.1..... pyrf- pCC74 (hta1-htb1)d::URA3 ampR
FB1172 MH1 Lorraine Marsh ***Good for transformation with Smash and Grab DNA*** see enclosed sheet in notebook for transformation procedure. MH1.1.....
FB1173 pCC45 Chris Clark 5.5kb Bgl frag of SPT6 cloned into BamHI site of YEp13. (orientation I) H IGH COPY SUPPRESSION HB101..... pCC45 SPT6 LEU2 2micron ampR
FB1174 Struhl#wt Struhl "TATA mut. in this plasmid= WT, but with RI and Sac sites flanking the HIS3 T ATA.REF= MCB dec89 p.5298-5304 Harbury + Struhl ***SEE NOTEBOOK*** " HB101..... pwt URA3 ampR his3-RIS integrating plasmid
FB1175 Struhl#201 Struhl TATA mut. in this plasmid is AATAAA. REF= MCB dec89 p. 5298-5304 Harbury + Struhl. ****SEE NOTEBOOK**** HB101..... p201 URA3 ampR his3-201 integrating plasmid
FB1176 Struhl#202 Struhl TATA mut.= CATAAA. REF= MCB dec89 p. 5298-5304 Harbury + Struhl ***SEE N OTEBOOK*** HB101..... p202 URA3 ampR his3-202 integrating plasmid
FB1177 Struhl#203 Struhl TATA mut.= GATAAA. REF= MCB dec89 p. 5298-5304 Harbury + Struhl ***SEE N OTEBOOK*** HB101..... p203 URA3 ampR his3-203 integrating plasmid
FB1178 Struhl#204 Struhl TATA mut.= TCTAAA REF= MCB dec89 p.5298-5304 Harbury + Struhl ***SEE NO TEBOOK*** HB101..... p204 URA3 ampR his3-204 integrating plasmid
FB1179 Struhl#205 Struhl mutant TATA seq= TGTAAA REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p205 ampR URA3 his3-205 integrating plasmid
FB118 B155 "Fink, Phil Carter orientation of insert unknown ?.101..... B155 Ty912 HIS4 URA3 amp
FB1180 Struhl#206 Struhl mutant TATA seq= TTTAAA REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p206 ampR URA3 his3-206 integrating plasmid
FB1181 Struhl#208 Struhl mutant TATA seq= TACAAA REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p208 ampR URA3 his3-208 integrating plasmid
FB1182 Struhl#209 Struhl mutant TATA seq= TAGAAA REF: MCB dec89 p. 5298-5304 Harbury and Struhl **S EE NOTEBOOK!** HB101..... p209 ampR URA3 his3-209 integrating plasmid
FB1183 Struhl#210 Struhl mutant TATA seq= TATCAA REF: MCB dec89 p. 5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p210 ampR URA3 his3-210 integrating plasmid
FB1184 Struhl#212 Struhl mutant TATA seq= TATTAA REF: MCB dec89 p.5298-5304 Harbury and Struhl **S EE NOTEBOOK!** HB101..... p212 ampR URA3 his3-212 integrating plasmid
FB1185 Struhl#213 Struhl mutant TATA seq= TATACA REF: MCB dec89 p.5298-5304 Harbury and Struhl **S EE NOTEBOOK!** HB101..... p213 ampR URA3 his3-213 integrating plasmid
FB1186 Struhl#214 Struhl mutant TATA seq= TATAGA REF: MCB dec89 p.5298-5304 Harbury and Struhl **S EE NOTEBOOK!** HB101..... p214 ampR URA3 his3-214 integrating plasmid
FB1187 Struhl#215 Struhl mutant TATA seq= TATATA REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p215 ampR URA3 his3-215 integrating plasmid
FB1188 Struhl#217 Struhl mutant TATA seq= TATAAG REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p217 ampR URA3 his3-217 integrating plasmid
FB1189 Struhl#218 Struhl mutant TATA seq= TATAAT REF: MCB dec89 p.5298-5304 Harbury and Struhl ** SEE NOTEBOOK!** HB101..... p218 ampR URA3 his3-218 integrating plasmid
FB119 Winston Bgl2-Xho internal LYS2 fragment in pBR322; LYS2 probe HB101..... pFW47 LYS2 amp
FB1190 Struhldoub Struhl mutant TATA seq= TATATAC REF: MCB dec89 p.5298-5304 Harbury and Struhl * *SEE NOTEBOOK!** HB101..... p215/238 "ampR URA3 his3-215,238 integrating plasmid
FB1191 B1295 Broach Lab unknown... pB1295 MATa LEU2 CEN ARS ampR
FB1192 B1311 Broach lab MATb (alpha) Hind3 cloned from LCIII 3a into YCp50 unknown... pB1311 MATb URA3 CEN ARS ampR
FB1193 pMS23 M. Swanson ~4kb Hind3-Kpn of pMS4 cloned into Hind3-Kpn of pRS316. SPT5 is truncated in the repeat region; partially comp. spt5-. REF: MCB 11: 3009-3019. 1991 TB1.own... pMS23 SPT5 URA3 ampR bluescript
FB1194 pJN22 Hans Ronne #NAME? HB101.n... pJN22 mig1-82::LEU2 ampR
FB1195 pJN41 Hans Ronne #NAME? HB101.n... pJN41 mig1-82::URA3 ampR
FB1196 p125-3 D. Eisenmann ~6.3kb Xho-Xho piece from original SPT15 clone-- located 3' to the SPT15 gen e and cloned into pRS316 HB101.n... p125-3 URA3 CEN ARS ampR
FB1197 pDE18-1 D. Eisenmann ~5.5kb Cla-Bam subclone with SPT15+ activity cloned into Cla-Bam of pRS316 ( see sheet inserted with FB1196) HB101.n... pDE18-1 SPT15 URA3 CEN ARS ampR
FB1198 pDE19-1 D. Eisenmann 3.6kb Bam-Cla frag located 3' of SPT15 gene cloned into Bam-Cla of pRS316 (s ee sheet inserted with FB1196) HB101.n... pDE19-1 URA3 CEN ARS ampR
FB1199 pDE23-8 D. Eisenmann ~5kb Hind3 piece containing part of SPT15 gene into pRS316 Hind3 site. **do es NOT have 15+ activity because the last 13aa are not contained in this f rag.** (see sheet inserted with FB1196) HB101.n... pDE23-8 URA3 CEN ARS ampR
FB12 none Winston opposite orientation of pFW1 B28.32.... trp B1 his (P2 eductant) pFW2 "E. coli hisOGD in YIp5, amp, weak tet
FB120 ES942 via Colin Manoil ES942..... mutD5 metE lacZ trpA F- none
FB1200 pDE24-8 D. Eisenmann ~4.4kb Hind3 frag located 3' to SPT15 gene (including CT of SPT15) cloned in to pRS316. (see sheet inserted with FB1196) HB101.n... pDE24-8 URA3 CEN ARS ampR
FB1201 pDE26-1 D. Eisenmann 2.4kb EcoRI-Bam piece containing SPT15 in YCp50. = original subclone of SPT 15 (see sheet inserted with FB1196) HB101.n... pDE26-1 SPT15 URA3 CEN ARS ampR
FB1202 pDE27-3 D. Eisenmann Cla-Xba piece containing truncated SPT15 gene in pRS316 [derived by Xba dige stion of pDE18-1= FB1197] see sheet inserted with FB1196 HB101.n... pDE27-3 URA3 CEN ARS ampR
FB1203 pDE69-1 D. Eisenmann 2.4kb RI-Bam piece containing spt15-21 in pRS316 (spt15-21 gene contains Sal I site upstream of the ATG put in by K. Arndt) HB101.n... pDE69-1 spt15-21 URA3 CEN ARS ampR
FB1204 p969-1 D. Eisenmann original gap rescued plasmid containing spt15-122 in pRS316. pDE38-9 was us ed to rescue this allele from FW969. HB101.n... p969-1 spt15-122 URA3 CEN ARS ampR
FB1205 p971-5 D. Eisenmann original plasmid from gapped rescue using pDE38-9 from strain FW971 into pRS 316 HB101.n... p971-5 spt15-135 URA3 CEN ARS ampR
FB1206 p1259-1 D. Eisenmann original plasmid from gapped rescue using pDE38-9 and strain FW1259 into pRS 316 HB101.n... p1259-1 spt15-21 URA3 CEN ARS ampR
FB1207 pFM23-1 D. Eisenmann "original plasmid from gapped rescue using pDE38-9 from FY183 (containing spt 15-23) into pRS316. Although this plasmid fails to complement 15-21 for h is+ phen., neither DME nor SLR could find a base change in the coding regi on. " HB101.n... pFM23-1 spt15-23 URA3 CEN ARS ampR
FB1208 pHCL17 D. Eisenmann "HCS= high copy suppressor. = plasmid from YEp24 High Copy Library that suppr esses lys- phen. of spt15-21, 15-122, spt3d (strains become his+ lys+/-) see also FB 1209, 1210. " HB101.n... pHCL17 2 micron URA3 ampR HCS of spt15
FB1209 pHCL26 D. Eisenmann "HCS= high copy suppressor. plasmid from YEp24 High Copy Library that suppre sses lys- phen. of spt15-21, 15-122 spt3d. (strains become his+ lys+/-) S ee also FB1208,1210. " HB101.n... pHCL26 2 micron URA3 ampR HCS of spt15
FB121 LE30 via Colin Manoil mutD mutagenesis increased by TdR (usually enough in LB) LE30...... mutD5 rpsL (strR) azi galU95 F- none
FB1210 pHCL30 D. Eisenmann "HCS= High Copy Suppressor. =plasmid from YEp24 High Copy Library that suppre sses lys- phen. of spt15-21, 15-122, spt3d (strains become his+ lys+/-) See also FB1208, 1209. " HB101.n... pHCL30 2 micron URA3 ampR HCS of spt15
FB1211 pSR7-1 D. Eisenmann original plasmid from gapped rescue using pDE38-9 from spt15-21 intragenic r evertant strain SR7 (into pRS316). AA change = F237V and G174E see also FB1212. HB101.n... pSR7-1 spt15-21R7 URA3 CEN ARS ampR
FB1212 pSR31-1 D. Eisenmann original plasmid from gapped rescue using pDE38-9 from spt15-21 intragenic r evertant strain SR31 (into pRS316). AA change=F237V and G174E same as fo r FB1211's SR7. HB101.n... pSR31-1 spt15-21R31 URA3 CEN ARS ampR
FB1213 pSR47-1 D. Eisenmann "original plasmid from gapped rescue using pDE38-9 from spt15-21 intragenic r evertant strain SR47 (into pRS316). AA change= F237V and G174E See also FB1211, 1212. " HB101.n... pSR47-1 spt15-21R47 URA3 CEN ARS ampR
FB1214 pDE79-3 D. Eisenmann spt15-237 (aa change= F237V; intragenic rev) in wild type background. (done by 3way ligation) It complements 15-21 and has no spt- phen. whem shuffled over the null. HB101.n... pDE79-3 spt15-237 TRP1 CEN ARS ampR
FB1215 pDE103-1 D. Eisenmann ~2.5kb RI-BglII piece from pFW27 containing SPT3 into pUC118 RI-Bam. HB101.n... pDE103-1 SPT3 ampR
FB1216 pDE121-6 D. Eisenmann SPT3 from plasmid pDE105-6 using primers ODE36 and ODE38. These put BamHI s ites at NT and CT of SPT3 open reading frame. Bam cut product was subclone d into pRS316 Bam. HB101.n... pDE121-6 SPT3 URA3 CEN ARS ampR
FB1217 pDE121-8 D. Eisenmann see FB1216 for comments (pDE121-8 is a diff. isolate). HB101.n... pDE121-8 SPT3 CEN ARS URA3 ampR
FB1218 p3-401 D. Eisenmann original plasmid from gapped rescue using pDE105-6 cut with MluI and XhoI in to spt15-21 revertant strain L805. p3-401 is in pMR79(=YCp50 with XhoI sit e knocked out) HB101.n... p3-401 spt3-401 URA3 CEN ARS ampR
FB1219 p3-445 D. Eisenmann spt3-445 rescued from FY652 (into pMR79 =YCp50 with Xho site knocked out). HB101.n... p3-445 spt3-445 URA3 CEN ARS ampR
FB122 G. Walker pKM101 derivative from Graham Walker JC2926.... recA13 plus many others; look in strain notebook pGW1514 "kanR, pKM101 derivative
FB1220 p3-1 D. Eisenmann spt3-1 rescued from FW240 (into pMR79 =YCp50 with Xho site knocked out). HB101.n... p3-1 spt3-1 URA3 CEN ARS ampR
FB1221 p3-426 D. Eisenmann spt3-426 rescued from FY648 (into pMR79 =YCp50 with Xho site knocked out). HB101.n... p3-426 spt3-426 URA3 CEN ARS ampR
FB1222 p3-429 D. Eisenmann spt3-429 rescued from FY649 (into pMR79 =YCp50 with Xho site knocked out). HB101.n... p3-429 spt3-429 URA3 CEN ARS ampR
FB1223 p3-417 D. Eisenmann spt3-417 rescued from FY647 into pMR79 (=YCp50 with Xho site knocked out). HB101..... p3-417 spt3-417 URA3 CEN ARS ampR
FB1224 p3-441 D. Eisenmann spt3-441 rescued from FY650 into pMR79 (=YCp50 with Xho site knocked out). HB101..... p3-441 spt3-441 URA3 CEN ARS ampR
FB1225 p3-443 D. Eisenmann spt3-443 rescued from FY651 into pMR79 (=YCp50 with Xho site knocked out). HB101..... p3-443 spt3-443 URA3 CEN ARS ampR
FB1226 pDE124-1 D. Eisenmann ~2.3kb RI-Xho frag from FB1218 (p3-401) into RI-Xho of pRS306 (for integrat ion of spt3-401). HB101..... pDE124-1 spt3-401 URA3 ampR
FB1227 pDE126-1 D. Eisenmann ~2.3kb RI-Xho frag containing spt3-429 from FB1222 (p3-429) into pRS306 RI-X ho (for integration of spt3-429) HB101..... pDE126-1 spt3-429 URA3 ampR
FB1228 pDE128-1 D. Eisenmann ~2.3kb RI-Xho frag containing spt3-445 from FB1219 (p3-445) into RI-Xho of p RS306. (for integration of spt3-445) HB101..... pDE128-1 spt3-445 URA3 ampR
FB1229 pDE132-23 D. Eisenmann SPT3 with Bam ends derived by PCR (see FB1216) cloned into pMA424 to create an in frame fusion of GAL4 1-147 to all of SPT3. (has SPT3+ activity) HB101..... pDE132-23 GAL4-SPT3 fusion HIS3 2micron ampR
FB123 Winston partial evictant of lys2-173R2 HB101..... pFW48 "amp, part of lys2-173R2
FB1230 pMG1 M. Gandhi . SalI-SpeI frag of SPT8 cloned into pRS316. TB1.1..... pMG1 SPT8 URA3 CEN ARS ampR
FB1231 pGAD10 S. Fields see enclosed sheet. HB101..... pGAD10 GAL4 LEU2 ampR
FB1232 pKA67 Ricupero/Arndt RI-Bam frag containing spt15-122 from pKA21 subcloned into RI-Bam of pRS316. (SalI site is present at spt15-122 ATG) HB101..... pKA67 spt15-122 URA3 CEN ARS ampR
FB1233 pKA68 Ricupero/Arndt ~2.4kb RI-Bam frag containing spt15-301 from pKA14 subcloned into RI-Bam of pRS316. (SalI site is present at spt15-301 ATG) HB101..... pKA68 spt15-301 URA3 CEN ARS ampR
FB1234 Nasmyth 2micron LEU2 library in YEp13 (2 vials frozen) unknown... 2micron LEU2 library 2micron LEU2 library
FB1235 pKA71 S. Ricupero HA mutagenized spt15-3 (FB998) to get intragenic suppressors of spt15-122 (s elected Lys+). This isolate= #13a A.A. change= P191S (CCT to TCT) + L205F (15-122) see also FB1236-1238. HB101.n... pKA71 spt15-319 ampR CEN ARS TRP1
FB1236 pKA72 S. Ricupero pKA71= intragenic sup candidate #13b. **SEE FB1235** HB101.n... pKA72 spt15-319 ampR CEN ARS TRP1
FB1237 pKA73 S. Ricupero PKA73= intragenic sup candidate #19. **SEE FB1235** HB101.n... pKA73 spt15-319 ampR CEN ARS TRP1
FB1238 pKA74 S. Ricupero pKA74= intragenic sup candidate# 33. **SEE FB1235** HB101.n... pKA74 spt15-319 ampR CEN ARS TRP1
FB1239 Struhl#216 Ricupero . mutant TATA seq= TATAAC. REF= MCB dec89 p.5298-5304 Harbury and Struhl **S EE ALSO FB1174-1190) HB101.n... p216 URA3 ampR integrating plasmid his3-216
FB124 FB124-FB152 all derivatives of pFW32 HB101..... pFW32-302 spt3-302
FB1240 pCC10 Christy ~6kb XhoI-Hind3 frag from pCC27 into SalI-Hind3 sites of YCp50. HB101.n... pCC10 spt6 subclone ampR URA3 CEN ARS
FB1241 pCC19 Christy Pvu-Sal 3.8kb frag containing SPT6 from pCC11 subcloned into YCp50 Pvu-Sal. HB101.n... pCC19 spt6 subclone URA3 CEN ARS ampR
FB1242 pCC32 Christy Hind3-Hind3 spt6 subclone (~1.5kb) cloned into YCp50 HB101.n... pCC32 spt6 subclone URA3 CEN ARS ampR
FB1243 pGEX-1 Glutagene (Cepko lab) see sheet inserted in notebook. HB101.n... pGEX-1 for fusions with glutathione-S-tranferase
FB1244 pGEX-2T Glutagene (Cepko lab) see sheet inserted in notebook. HB101.n... pGEX-2T for glutathione-S-transferase fusions
FB1245 pGEX-3X Glutagene (Cepko lab) see sheet inserted in notebook. HB101.n... pGEX-3X for glutathione-S-tranferase fusions
FB1246 pPYKc/g R. Kornberg see sheet inserted in notebook. HB101.n... pPYKc/g PYKI promoter ampR
FB1247 pCC60 Chris Clark 5.7kb SalI frag from HTA1-HTB1 cloned into the SalI site of YCp50 HB101..... pCC60 HTA1-HTB1 URA3 tetS ampR
FB1248 pCC72 Chris Clark 1.4kb HTA1-HTB1 Hind3 frag was cloned into hind3 sites of pUC13-d16b (FB584= arsd of HTA1-HTB1) which has lost the 1.1kb H3 promoter frag. HB101..... pCC72 HTA1-HTB1d ampR
FB1249 pJH20 Hirschhorn 1.8kb StyI frag of Yip5 TRT2 into StyI site of pBR322 HB101..... pJH20 HTA2-HTB2 truncated ampR TcR
FB125 HB101..... pFW32-306 spt3-306
FB1250 pJH21 Hirschhorn TRP1+ Bam-Bgl frag from pBM453 (FB451) into BglII of pJH20 (FB1249) HB101..... pJH21 (hta2-htb2)d::TRP1 ampR TcR
FB1251 pJH23 Hirschhorn Bam-SacII 2.6kb frag from pCC60 (FB1247) into Bam- SacII of pRS313 unknown... pJH23 HTA1-HTB1 HIS3 CEN ampR
FB1252 pJH24 Hirschhorn RI-Bam HTA2-HTB2 frag from Yip5 into RI-Bam of pRS316 unknown... pJH24 HTA2-HTB2 URA3 CEN ampR
FB1253 pJH28 Hirschhorn 1.1kb Hind3 frag from pRB58 (FB997) into Hind3 of pRS316 TB1.own... pJH28 SUC2 promoter URA3 CEN ampR
FB1254 pJH29 Hirschhorn ~160bp RI-Hind3 frag from pJH28 (FB1253) --upstream of SUC2-- into RI-Hind3 sites of pUC19 TB1.own... pJH29 SUC2 upstream ampR
FB1255 pJH26 Hirschhorn Bam-SalI frag from pJH24 (FB1252) into Bam-SalI of pRS424 TB1....... pJH26 HTA2-HTB2 TRP1 2micron ampR
FB1256 pJH31 Hirschhorn Bam-SalI frag fron pJH24 (FB1252) into Bam-SalI of pRS425 TB1....... pJH31 HTA2-HTB2 LEU2 2micron ampR
FB1257 pJH35 Hirschhorn H3-H3 frag from pJH28 (FB1253) into H3 of pUC19 TB1....... pJH35 SUC2 promoter ampR
FB1258 pJH38 Hirschhorn pJH35 (FB1257) MluI NcoI filled in and YEp24 H3 (URA3 frag) filled in FB600..... pyrf pJH38 suc2-101::URA3 ampR
FB1259 pJH42 Hirschhorn 1. RI-H3 from pJH28 (FB1253) into RI-H3 of mp19. 2. dut ung mut. with S2Tk (TATAAA to GGTACC). 3. RI-H3 frag into RI-H3 of pUC19. TB1.0..... pJH42 suc2-104 ampR
FB126 HB101..... pFW32-307 spt3-307
FB1260 RZ1032 B. Berg for dut ung mutagenesis RZ1032.... dut1 ung1 thi1 relA HfrKL16 PO/45 [lysA61-62] 2bd-279::Th10 supE44
FB1261 pCT1 Rick Young ***DO NOT GIVE OUT!!*** DH5alpha.. pCT1 srb2-1 URA3 CEN ARS ampR
FB1262 pCT19 Rick Young ***DO NOT GIVE OUT!!*** DH5alpha.. pCT19 SRB2 URA3 CEN ARS ampR
FB1263 BC9b Brendan Cormack (Struhl) ***There is ANOTHER SmaI site in the pBR portion*** HB101.ha.. pBC9b DED1 promoter GCN4 3'UT URA3 CEN ampR
FB1264 GN1561-1 Georges Natsoulis MNase engineered so that coding region is flanked by BamHI and SalI sites-- then cloned into pUC19. ***ONLY mature protein coding seq.--NO ATG!!*** REF: Nature 352:632-5 for 5' Bam site. HB101.ha.. pGN1561-1 Micrococcal Nuclease (staphylococcal Nuc.) ampR
FB1265 pCC27 Chris Clark SPT6 in YCp50. unknown... pCC27 SPT6 URA3 CEN ARS ampR
FB1266 GAL1-cDNA Tony Bretscher GAL1-cDNA library REF: Genetics 132 (1992) p. 665-673 DH10B GAL1-cDNA library
FB1267 771 Roger Brent EcoRV-RsaI frag containing cyc1-512 into StuI site of pRB486 (see enclosed s heet) HB101.n... p771 cyc1-512 terminator ampR
FB1268 798 Roger Brent EcoRV-RsaI containing CYC1 into StuI site of pRB486 (see enclosed sheet). HB101.n... p798 CYC1 terminator ampR
FB1269 pPK606 M. Grunstein REF: CELL 55:27-39 MH1....... pPK606 hhf2d(4-23) CEN URA3 ampR
FB127 HB101..... pFW32-309 spt3-309
FB1270 pPK617 M. Grunstein REF: CELL 55:27-39 MH1....... pPK617 hhf2d(4-14) CEN URA3 ampR
FB1271 pPK618 M. Grunstein REF: CELL 55:27-39 MH1....... pPK618 hhf2d(4-19) CEN URA3 ampR
FB1272 pUK499 M. Grunstein REF: EMBO 7:2211-2219 HB101..... pUK499 HHF2 CEN URA3 ampR
FB1273 pUK192 M. Grunstein REF: EMBO 11:3297-3306 HB101..... pUK192 (hht1-hhf1)d::LEU2 ampR
FB1274 pUK431 M. Grunstein REF: EMBO 11:3297-3306 HB101..... pUK431 (hht2-hhf2)d::HIS3 ampR
FB1275 pTaq-DNAP G. Hartzog Taq Polymerase expression vector REF: Anal Biochem 191: 396-400 HB101..... pTaq-DNAP ampR Taq. Pol. vector
FB1276 pJH359 R. Young REF: Nature 347: 493 contains 205bp MaeII DNA frag containing the INO1 U AS inserted at the XhoI site of UAS-less CYC1-lacZ fusion vector pJH304 unknown... pJH359 CYC1 TATA-lacZ INO1UAS ampR 2u
FB1277 pLGSD5 R. Young REF: Nature 347: 493 contains the GAL10 UAS inserted at the XhoI site to r eplace the CYC1 UAS in the CYC1-lacZ fusion vector pLGd2925 unknown pLGSD5 CYC1 TATA-lacZ GAL10-UAS ampR 2u
FB1278 pHYC3 R. Young REF: Nature 347: 493 contains HIS4 UAS inserted at the XhoI site to repla ce the CYC1 UAS in the CYC1-lacZ fusion vector pLG669-2 unknown... pHYC3 CYC1 TATA-lacZ HIS4-UAS ampR 2u
FB1279 pCT3 R. Young #NAME? unknown... pCT3 "URA3 ampR CEN ARS Bluescript KS polylinker T3,T7 promoters
FB128 . DB6507.... pFW32-318 spt3-318
FB1280 pCT15 R. Young =2.5kb frag containing SRB4 into ploylinker of pCT3 **see FB1279** unknown... pCT15 SRB4 URA3 CEN ARS ampR
FB1281 pCT48 R. Young "2.5kb frag containing srb4-1 into pCT3 **see also FB1280, FB1279** " unknown... pCT48 srb4-1 URA3 CEN ARS ampR
FB1282 pCT39 R. Young 1.9kb insert --- obtained by gap repair of SacI/XhoI of pCT32 (FB1283) unknown... pCT39 SRB5 URA3 CEN ARS ampR
FB1283 pCT32 R. Young "see also FB1282, FB1279 " unknown... pCT32 srb5-1 URA3 CEN ARS ampR
FB1284 pCT40 R. Young pCT40 (SRB6) obtained by gap repair of BalI/SphI in pCT29 (FB1285) unknown... pCT40 SRB6 URA3 CEN ARS ampR
FB1285 pCT29 R. Young "see also FB1284, FB1279 " unknown... pCT29 srb6-1 URA3 CEN ARS ampR
FB1286 pAB24 Chiron Corp. (T. Brake) ***K. lactis library*** REF: NAR vol.19 No.19: 5345-5350. See Yeast Library notebook DH5.own... pAB24 K. lactis library URA3 ampR
FB1287 pJH310 S. Henry . "REF: Hirsch + Henry (1986) MCB 6, 3320-3328 see also FB1288 and sheets in n otebook. " unknown pJH310 INO1 ampR SP6 promoter
FB1288 pJH311 S. Henry . "REF: Hirsch + Henry (1986) MCB 6, 3320-3328. See also FB1287 AND SHEETS IN NOTEBOOK " Unknown pJH311 INO1 ampR SP6 promoter
FB1289 RS426-TDS1 Buratowski. TDS1 is a high copy suppressor of YEpGAL-IID[R105]. Vector= pRS426 unknown pRS426-TDS1 TDS1 URA3 2micron ampR
FB129 . DB6507.... pFW32-319 spt3-319
FB1290 pL909 B. Berg (U. Chicago) REF: Apricio et al. CELL 66: 1279-1287 (1991) contains a 3.6kb ADE2 BamHI frag in YEp13. unknown... pL909 ADE2 ampR
FB1291 pdADE2 B. Berg (U. Chicago) REF: Aparicio et al. CELL 66:1279-1287(1991) Alani et al. Genetics 116:541 (1987) =ADE2::hisG URA3 disruption in bluescript derivative pV21 unknown... pdADE2 ADE2::hisGURA3 ampR
FB1292 pHB25 Henry Baker = 7.4kb SalI frag of the GCR region into which the 3.5kb BclI frag was repla ced by 3.5kb BglII LEU2 frag (in pBR322) unknown... pHB25 gcr::LEU2 ampR
FB1293 pHB45 Henry Baker BclI frag of GCR replaced with BamHI HIS3 frag into SalI of pBR322. See als o FB1292. unknown... pHB45 gcr::HIS3 ampR
FB1294 pLG36 L. Gansheroff FB422 plasmid cut with XbaI and SacI; insert LEU2 on Xba/Sac frag cut out of FB942 HB101.n... pLG36 ste12d::LEU2 URA3 ampR
FB1295 pBM290 Johnston . "REF: Yocum + Johnston (1984) Gene 32,75-82. =GAL80 disruption plasmid. GAL 80 gene is NOT present on this plasmid. See enclosed sheets. " unknown pBM290 URA3 SUP11 GAL80 flanking sequences ampR
FB1296 pBM1974 Johnston . "REF; Griggs + Johnston (1993) MCB 13, 4999-5009 See enclosed sheets. " unknown pBM1974 GAL4-CAT fusion URA3 ampR
FB1297 pmlc28ARG4 Szostak via C. Epstein ARG4 3.2kbp Pst frag in pmlc28 **See enclosed sheets** MC1061.... pmlc28Pst6ARG4 ARG4 CmR
FB1298 pmlc12ARG4 Szostak via C. Epstein Full plasmid name= pmlc12PstARG4BglIIFill (BamHI URA3) BglII site in ARG4 mutated to create ClaI site (in pmlc12) **see enclosed sheets** MC1061.... pmlc12PstARG4BglII arg4 URA3 CmR
FB1299 pACR1 Roger Brent DH5 (?).. pACR1 ACR1 ampR URA3
FB13 B44/pFW3 Winston YIp5 with the HindIII site destroyed by filling in with reverse transcriptas e DB6507.... HB101 pyrF74::Tn5 pFW3 URA3 amp
FB130 . DB6507.... pFW32-322 spt3-322
FB1300 pdACR1 Roger Brent DH5 (?) pdACR1 acr1::URA3 ampR LEU2
FB1301 LR1d1 Roger Brent GAL1 deleted UAS leaves XhoI site. NO LexA ops. this strain is the negati ve control for FB1302-FB1306. DH5 (?). LR1d1 GAL1dUAS-lacZ URA3 ampR 2micron
FB1302 pSH18-18 Roger Brent "see also FB1301, FB1303-1306. " DH5 (?).. pSH18-18 GAL1dUAS-lacZ URA3 2u ampR LexA ops. (6)
FB1303 pRB1840 Roger Brent "see also FB1301-1302, FB1304-1306 " DH5 (?).. pRB1840 GAL1dUAS-lacZ URA3 2u ampR LexA op.
FB1304 pSH18-34 Roger Brent "see also FB1301-1303, FB1305-1306 " DH5 (?).. pSH18-34 GAL1dUAS-lacZ URA3 2u ampR LexA ops (8)
FB1305 pSH18-8 Roger Brent "see also FB1301-1304, FB1306 " DH5 (?).. pSH18-8 GAL1dUAS-lacZ URA3 ampR 2u LexA ops. (4)
FB1306 SH1834dspe Roger Brent see also FB1301-1305 DH5 (?).. pSH18-34dspe GAL1dUAS-lacZ URA3 ampR integrating LexA ops.
FB1307 pSH17-4 Roger Brent unknown... pSH17-4 HIS3 LexA-GAL4 ampR 2u
FB1308 pCY40 Tom Stevens REF: MCB 10:3737 Use 4.3kb HindIII frag for disruption. MC1066.... pCY40 vat2d1::LEU2 ampR
FB1309 pGH2 Grant Hartzog MC1061.... pGH2 TRP1 ARS1 ampR (in SP72)
FB131 Winston DB6507.... pFW32-326 spt3-326
FB1310 pGH4 Grant Hartzog MC1061.... pGH4 SPT6 CEN ARS URA3 ampR
FB1311 pGH5 Grant Hartzog 3.33kb Bam-H3 frag from FB1087 into Bam-H3 cut pRS426 MH1.61.... pGH5 GAL4 ampR URA3 2u
FB1312 pGH6 Grant Hartzog 3.33kb Bam-H3 frag containing GAL4 into Bam-H3 cut pRS425 MH1.61.... pGH6 GAL4 ampR LEU2 2u
FB1313 pGH7 Grant Hartzog MC1061.... pGH7 SPT5 HIS3 ADH promoter ampR 2u
FB1314 pGH8 Grant Hartzog MH1.61.... pGH8 SPT5 TRP1 ampR 2u GAL1 promoter
FB1315 pGH9 Grant Hartzog "see also FB1313, FB1314 " MH1.61.... pGH9 SPT5 coding ampR
FB1316 pJK101 Roger Brent LacZ reporter with upstream UAS and intervening lexA operator. For Blockin g Assay. ***DO NOT DISTRIBUTE!!*** MC1061 pJK101 URA3 ampR GAL1-lacZ LexA binding downst. UAS
FB1317 pJG4-4 Roger Brent = version of pJG4-5 (FB1319) that lacks ATG-Nuc. loc. epitope tag-acidic act ivator. For two hybrid system. ***DO NOT DISTRIBUTE!!*** MH1 pJG4-4 TRP1 ampR 2u ori Gal1 promoter ADH terminator
FB1318 pJG4-6 Roger Brent = version of pJG4-5 (FB1319) that has ATG-epitope tag but lacks the nuclear localization signal and acidic activation domain. For two hybrid system. ***DO NOT DISTRIBUTE!!*** MH1 pJG4-6 ampR TRP1 2u ori Gal1 promoter ADH terminator
FB1319 pJG4-5 Roger Brent See enclosed sheets for more info. ***DO NOT DISTRIBUTE!!*** MC1061 pJG4-5 ampR TRP1 2u ori Gal1 promoter ADH terminator
FB132 Winston DB6507.... pFW32-327 spt3-327
FB1320 pJG4-5s Roger Brent See enclosed sheets for more info ***DO NOT DISTRIBUTE!!*** MH1 pJG4-5s ampR TRP1 2u ori Gal1 promoter ADH terminator
FB1321 pRFHM1 Roger Brent REF: Nature 350:250 ***DO NOT DISTRIBUTE!!*** MC1061.... pRFHM1 HIS3 ampR 2u deriv LexA 202+PL
FB1322 pEG202 Roger Brent = deriv. of LexA202+Pl see enclosed sheets for more info ***DO NOT DISTRIB UTE!!*** MC1061 pEG202 HIS3 2u ampR LexA
FB1323 DH10/P3 Grant Hartzog E. coli strain for propagating supF plasmids DH10/P3... "F- mcrA d(mrr-hsd RMS-mcrBC) 0 80d lacZdM15 dlacX74 deoR recA1 arad139 a(ara, leu)7697 galu galk
FB1324 pSR1-2 Shannon Roberts 7.3kb Cla-RI frag from pFW127 inserted into Cla-RI of pRS404 DH5 alpha. pSR1-2 SPT7 ampR TRP1
FB1325 pSR2-1 Shannon Roberts 3.1kb Sal-Spe frag cont. SPT8 from pFW120 inserted in Sal-Spe polylinker of pRS405 MH1.alpha. pSR2-1 SPT8 LEU2 ampR
FB1326 pSR3 Shannon Roberts #NAME? DH5 alpha. pSR3 URA3 2u ampR
FB1327 pSR4-5 Shannon Roberts constructed by cutting out 3kb Sal-Spe SPT8 frag from pMG1 and inserting it into Sal-Spe of pSR3 (FB1326) ***for epitope tagging SPT8*** DH5 alpha. pSR4-5 SPT8 URA3 2u ampR
FB1328 pSR5 Shannon Roberts 3kb SPT8 Sal-Spe frag into Sal-Spe of pRS426 DH5 alpha. pSR5 SPT8 URA3 2u ampR
FB1329 pSR6-3 Shannon Roberts SPT8 tagged at N term. DH5 alpha. pSR6-3 SPT8-myc epitope URA3 ampR 2u
FB133 Winston DB6507.... pFW32-328 spt3-328
FB1330 pSR7-3 Shannon Roberts 3.1kb Sal-Spe SPT8-N term myc epitope tagged prot. from pSR6-3 (FB1329) into Sal-Spe of pRS424 DH5 alpha. pSR7-3 SPT8-myc epitope TRP1 ampR 2u
FB1331 EB191 Elaine Elion STE12 tagged at C term. HB101.pha. pNC252 2u URA3 ampR GAL1 STE12-myc epitope
FB1332 pJS90 Marian Carlson REF: MCB 10:4744 HB101..... pJS90 ssn6d9URA3 ampR
FB1333 pLN113-3 Marian Carlson REF: MCB 7:3637 HB101..... pLN113-3 SSN6 2micron ampR URA3+
FB1334 pLexASNF2 Marian Carlson REF: PNAS 88:2687 HB101..... pLexASNF2 LexA-SNF2 2micron HIS3 ampR
FB1335 pLexASNF5 Marian Carlson REF: MCB 10:5616 HB101..... pLexASNF5 LexA-SNF5 2micron HIS3 ampR
FB1336 pLexASNF6 Marian Carlson REF: Genes + Dev. 6:1707 NOTE: this is LexA 1-202 + SNF6 according to B. L aurent. HB101..... pLexASNF6 LexA-SNF6 2micron HIS3 ampR
FB1337 pGP59 Greg Prelich = original BUR1+ clone from YCp50 Bam/Sau3A library. (Complements bur1-1 and bur1-2 HB101..... pGP59 ampR URA3 CEN ARS BUR1
FB1338 pGP73 Greg Prelich = original clone from YCp50 CEN library (Complements bur5-1) HB101..... pGP73 ampR URA3 CEN ARS copyII (HHT2-HHF2)
FB1339 pGP74 Greg Prelich = an original bur5-1 complementing plasmid isolated from YCp50 CEN library. HB101..... pGP74 ampR CEN ARS URA3 BUR5 (copyI=HHT1-HHF1)
FB134 Winston DB6507 pFW32-330 spt3-330
FB1340 pGP89 Greg Prelich a 4.5kb EcoRI frag from pGP59 (FB1337) containing BUR1+ subcloned into EcoRI site of YIp5 HB101..... pGP89 ampR tetR URA3 BUR1frag.
FB1341 pGP103 Greg Prelich ~2250bp ClaI frag from pGP91 containing BUR1+ was put into pRS316 ClaI vecto r (=partial BUR1 clone---complements bur1-) HB101..... pGP103 ampR CEN URA3 BUR1
FB1342 pGP105 Greg Prelich a 1227bp TRP1 Bam/Bgl frag of YRp7 was put in place of the 170bp BglII frag in pGP103 (FB1341) to create a bur1d marked by TRP TB1 pGP105 ampR CEN URA3 bur1d1::TRP1
FB1343 pGP147 Greg Prelich a 6kb SphI frag of pGP74 (FB1339) containing BUR5 was subcloned into the Sph I site of YCp50 (Complements bur5-1) TB1.1..... pGP147 ampR CEN ARS URA3 HHT1-HHF1
FB1344 pGP150 Greg Prelich a 3kb KpnI-PvuII frag from pGP147 (FB1343) was cloned into the KpnI-SmaI sit es of pRS416 TB1.1..... pGP150 ampR CEN6 ARS1+4 URA3 HHT1
FB1345 pGP153 Greg Prelich 1.6kb SphI-ClaI frag from pGP147 (FB1343) was put into the SphI-ClaI sites o f YCp50. TB1.1..... pGP153 ampR CEN4 ARS1 URA3 HHT1-HHF1
FB1346 pGP154 Greg Prelich a 1.2kb EagI-KpnI frag from pGP147 (FB1343) was put into the EagI-KpnI sites of pRS416. TB1.1..... pGP154 ampR CEN6 ARS URA3 HHF1
FB1347 pGP156 Greg Prelich "a 5.4kb frag of pMS191 was put into the Bam-Hind3 sites of pRS305 to allow i ntegration at copyI, marked by LEU2, after SmaI linearization. " TB1.1..... pGP156 ampR LEU2 HHT1-HHF1
FB1348 pLG40 Lisa Gansheroff E. coli is SICK! See notebook. HB101..... pLG40 "his4-912d::URA3, lacZ ampR
FB1349 pLG41 Lisa Gansheroff E. coli is SICK! See notebook. HB101..... pLG41 "his4-912d::URA3, lacZ ampR
FB135 Winston DB6507.... pFW32-332 spt3-332
FB1350 pLG39 Lisa Gansheroff E. coli is SICK! See notebook. HB101..... pLG39 Ty912d44-lacZ fusion frag URA3 ampR
FB1351 pLG56 Lisa Gansheroff E. coli is SICK! See notebook. HB101..... pLG56 Ty912d44-lacZ fusion frag URA3 ampR
FB1352 pSAB3 Steve Brown SalI-SalI frag containing HTA1-HTB1 (5.7kb) into pRS316 TB1.1..... pSAB3 URA3 ampR CEN ARS HTA1-HTB1
FB1353 pSB17 Steve Brown = a derivative of pSAB3 (FB1352) mutagenized by HA (HTA1-46: dhH=G46D) See enclosed sheets in notebook. HB101..... pSB17 URA3 ampR CEN ARS HTA1-46
FB1354 pSB6 Steve Brown = a derivative of pSAB3 (FB1352) mutagenized by HA (HTA1-48: ddhA=G48D) se e enclosed sheets in notebook. HB101..... pSB6 URA3 ampR CEN ARS HTA1-48
FB1355 pSB23 Steve Brown =a derivative of pSAB3 (FB1352) mutagenized by HA (HTA1-61: dhV=A61T) see e nclosed sheets in notebook. HB101..... pSB23 URA3 CEN ARS ampR HTA1-61
FB1356 pSB7 Steve Brown =a derivative of pSAB3 (FB1352) mutagenized by HA (HTA1-90: ddhC=R90I) se e enclosed sheets in notebook. HB101..... pSB7 URA3 CEN ARS ampR HTA1-90
FB1357 pSB19 Steve Brown =a derivative of pSAB3 (FB1352) mutagenized by HA (HTA1-107: dhN=G107D) s ee enclosed sheets in notebook. HB101..... pSB19 URA3 CEN ARS ampR HTA1-107
FB1358 pSB9 Steve Brown =a derivative of pSAB3 (FB1352) mutagenized by HA (HTB1-105: ddHE=A105D) see enclosed sheets in notebook. HB101..... pSB9 URA3 CEN ARS ampR HTB1-105
FB1359 XL1-Blue Stratagene can use for M13 helper phage preps. See enclosed sheets in notebook. XL1-Blue recA1 endA1 gyrA96 thi-1 hsdR17 supE44 relA1 lac[F` proAB lacIq ZdM15 tn10 tet-]
FB136 Winston DB6507.... pFW32-334 spt3-334
FB1360 pJL202 Schiestl .b replaces URA3 with a 1.1kb copy of HIS3 (complete deletion of URA3) MH1.Blue.. pJL202 ura3::HIS3 ampR
FB1361 pREP3X Enoch #NAME? MH1.Blue.. pREP3X nmt-1 promoter LEU2 ampR
FB1362 pM1329 Stillman 1.2kb PstI-RI subclone of CTS1 into pUC13 ***Northern Probe*** see sheets in notebook. unknown... pM1329 CTS1 ampR
FB1363 pM1591 Stillman contains 1.3kb upsteam of CTS1. See enclosed sheets. unknown... pM1591 CTS1-lacZ URA3 ampR
FB1364 pHIR1::URA Osley 1.4 BglII frag of HIR1 replaced with 1.1kb URA3 frag into YIp5. REF: Sherwo od et al MCB 1993 vol.13 no.1 p.28-38. HB101.n... pHIR1::URA3 HIR1::URA3 ampR URA3
FB1365 pHIR1::LEU Osley 1.4kb BglII frag of HIR1 replaced with 3kb LEU2 BglII frag REF: Sherwood e t al MCB 1993 vol.13 no.1 p.28-38. HB101.n... pHIR1::LEU2 HIR1::LEU2 ampR URA3
FB1366 pGEM150- Howley lab Bam-H3 frag of E6-AP in pGEM1 REF: Huibreqtse et al MCB 13:775-784 1993 HB101.n... pGEM150-120 E6-AP ampR
FB1367 pFW272 Stephanie Ricupero Bam-H3 frag containing E6-AP from FB1366 cloned into BglII-H3 of FB1080 (pDA D2) HB101.n... pFW272 ampR URA3 2micron E6-AP GAL10 promoter
FB1368 pRB1027 Roger Brent REF: Cell 43:729-736 HB101.n... pRB1027 PADH1-LexA-GAL4 fusion 2micron LEU2 ampR
FB1369 pAAH5 Roger Brent HB101.n... pAAH5 PADH1vector 2micron LEU2 ampR
FB137 Winston DB6507.... pFW32-335 spt3-335
FB1370 p1107 Roger Brent derived from pLG670Z (FB1373) HB101.n... p1107 LexAop CYC1-TATA-LacZ fusion URA3 ampR 2micron
FB1371 pRB1345 Roger Brent vector= pAAH5 (FB1369) HB101.n... pRB1345 PADH1-LexA-GCN4 fusion 2micron ampR LEU2
FB1372 pJLb-17b3 Roger Brent HB101.n... pJLb-17b3 GAL4 binding site CYC1-TATA-LacZ URA3 2micron ampR
FB1373 pLG670Z Roger Brent *** NO UAS *** REF: PNAS 78 2199-2203 (1981) HB101.n... pLG670Z CYC1-TATA-LacZ URA3 ampR 2micron
FB1374 Bd1128 G. Mikesell = pGAL::HIS3 in YCp50 REF: Genes + Dev. 5:1183-1190 HB101.n... Bd1128 pGAL::HIS3 ampR CEN ARS URA3
FB1375 Bd824 Mikesell =pGAL::SWI4 in YCp50 REF: Genes and Dev. 5:1183-1190 HB101..... Bd824 pGAL::SWI4 URA3 CEN ARS ampR
FB1376 pSR9.15 S. Roberts MH1.1..... pSR9.15 SPT8 CEN URA3 ampR
FB1377 pBBB2 Barbara Berg =NdeI-BamHI frag containing SPT3 from pDE118-8 into NdeI-BamHI of pET-3C (FB 894) SEE SHEETS IN NOTEBOOK. BL21(DE3). see enclosed sheets for info on host. Bl21(DE3) also contains pLysS w hich is CmR. pBBB2 T7 promoter ampR SPT3 CmR
FB1378 pBBB9 Barbara Berg PvuII-SalI frag containing rsp5 from pFW201 subcloned into pRS316 VJS533.3). #NAME? pBBB9 ampR CEN ARS URA3 rsp5 PvuII-SalI frag
FB1379 pBBB10 Barbara Berg BamHI-HindIII frag containing rsp5 from pFW201 subcloned into pRS316 VJS533.3). #NAME? pBBB10 ampR CEN ARS URA3 rsp5 BamHI-HindIII frag
FB138 Winston DB6507.... pFW32-336 spt3-336
FB1380 pBBB11 Barbara Berg BamHI-BamHI frag containing rsp5 from pFW201 subcloned into pRS316 VJS533.3). #NAME? pBBB11 ampR CEN ARS URA3 rsp5 BamHI-BamHI frag
FB1381 pBBB12 Barbara Berg SalI-HindIII frag containing rsp5 from pFW201 subcloned into pRS316. ***NOT E: construct may be incorrect*** VJS533.3). #NAME? pBBB12 ampR CEN ARS URA3 rsp5 SalI-HindIII frag
FB1382 pBBB13 Barbara Berg KpnI-HindIII frag containing rsp5 from pFW201 subcloned into pRS316. ***NOT E: constrcuct may be incorrect!*** VJS533.3). #NAME? pBBB13 ampR CEN ARS URA3 rsp5 KpnI-HindIII frag
FB1383 pBBB14 Barbara Berg BamHI-SalI frag containing rsp5 from pFW201 subcloned into pRS316 VJS533.3). #NAME? pBBB14 ampR CEN ARS URA3 rsp5 BamHI-SalI frag
FB1384 pSH2-1 Brent lab REF: Cell 51:113; 1987 Cell 43:729; 1985 **LexA polylinker vector** unknown.). pSH2-1 ADH1promoter-lexA ampR 2micron HIS3
FB1385 KB125 Ricupero/Arndt ~1.9kb SpeI frag containing 2micron origin was excised from p1107 (FB1370) a nd plasmid was religated. HB101..... pKA113 LexA Op CYC1-TATA-lacZ URA3 ampR integrating
FB1386 pAS1-CHY2 Steve Ellidge for 2 hybrid experiments MH1.1..... pAS1-CHY2 ampR 2micron CYH2 TRP1 ADHp-GAL4-HAI fusion
FB1387 YEpCHY1 Elion lab plasmid ~5.4kb of cyh2R gene in YEp24 **cycloheximide resistant** MH1.1..... YEpCHY1 URA3 ampR 2micron cyh2R
FB1388 pSR10-1 Shannon Roberts NOTE: used for interaction trap. See enclosed sheets. MH1.1..... pSR10-1 ampR HIS3 2micron LexA(1-202)-SPT8(35-602)
FB1389 pSR11-8 Shannon Roberts NOTE: used for interaction trap. See enclosed sheets. MH1.1..... pSR11-8 ampR TRP1 2micron B42-SPT8(35-602)
FB139 Winston DB6507.... pFW32-339 spt3-339
FB1390 pJM124myc Eun-Chung Park REF: Embo vol.11 No.6 p.2087-2093 (1992) unknown... pJM124myc NAT-myc LEU2 ampR 2micron
FB1391 ARDmyc Eun-Chung Park REF: Embo Vol.11 No.6 p.2087-2093 (1992) unknown... YEp24ARDmyc URA3 ARDmyc ampR 2micron
FB1392 pmcm1-1 M. Harris 3.3kb SphI-BamHI frag containing mcm1-1 inserted into Yip5. HB101.n... pmcm1-1 mcm1-1 ampR URA3
FB1393 pJH662 Jim Haber see sheets. BJH5..n... pJH662 ampR MATalpha tsm1::LEU2
FB1394 pJH569 Jim Haber see sheets. BJH2..n... pJH569 URA3 ampR TSM1 MATa inc.
FB1395 pSV14 Roger Brent GAL4 17mer is 178bp upstream of CYC1 TATA HB101.n... pSV14 GAL4 17mer CYC1-TATA-lacZ fusion URA3 ampR 2micron
FB1396 pRR330 Louis Prakash =plasmid for RAD9 knockout. REF: MCB 1989 Vol.9 No.5 p.1882 unknown... pRR330 RAD9::URA3 ampR
FB1397 pGN1262 Jef Boeke for 1-step deletion-insertion of SPT21 (cut with XhoI and transform) XL-Blue... pGN1262 URA3 ampR SPT21
FB1398 pLG72 Lisa Gansheroff insert= HindIII frag from pDBE6 containing unstable derivative of U6 gene v ector= pRS306 cut with HindIII ***DO NOT GIVE OUT--SEE SHEET!*** HB101.e... pLG72 U6 unstable derivative ampR URA3
FB1399 pLG73 Lisa Gansheroff same construct as pLG72 (FB1398) but insert is in opposite direction. ***DO NOT GIVE OUT--SEE SHEET!*** HB101.e... pLG73 U6 unstable derivative ampR URA3
FB14 B44/pFW4 Winston SalI site destroyed by filling in with reverse transcriptase DB6507.... HB101 pyrF74::Tn5 pFW4 "URA3, amp
FB140 Winston DB6507.... pFW32-343 spt3-343
FB1400 pLG74 Lisa Gansheroff insert= HindIII frag from pDBE6 containing an unstable (mRNA) derivative of U6 gene. vector= pRS316 cut with HindIII ***DO NOT GIVE OUT--SEE SHEET!* ** HB101.e... pLG74 U6 unstable derivative ampR URA3 CEN ARS
FB1401 pLG75 Lisa Gansheroff same construct as pLG74 (FB1400) but insert is in the opposite orientation. ***DO NOT GIVE OUT--SEE SHEET!*** HB101.e... pLG75 U6 unstable derivative ampR URA3 CEN ARS
FB1402 pLG76 Lisa Gansheroff insert= EagI-SalI frag from FB1148 containing N terminal half of SPT7 vect or= plasmid FB374 (C term. half of SPT7 in YCp50) cut with EagI and SalI. HB101.e... pLG76 SPT7 CEN URA3 ampR
FB1403 pLG77 Lisa Gansheroff insert= EagI-SalI frag from FB1149 containing N term. half of SPT7 with brom odomain deleted vector= plasmid of FB374 (C term. half of SPT7 in YCp50) cut with EagI and SalI. HB101.e... pLG77 spt7 bromodomain deletion CEN URA3 ampR
FB1404 pLG78 Lisa Gansheroff insert= EagI-SalI frag from FB1148 containing N term. half of SPT7 vector = plasmid of FB384 (C term. half of SPT7 in YIp5) cut with EagI and SalI HB101.e... pLG78 ampR URA3 SPT7
FB1405 pLG79 Lisa Gansheroff insert= EagI-SalI frag from FB1149 containing N term. half of SPT7 with Brom odomain deleted vector= plasmid of FB384 (C term. half of SPT7 in YIp5) cut with EagI and SalI HB101.e... pLG79 spt7 bromodomain deletion ampR URA3
FB1406 D16pUC13+ MaryAnn Osley =deletion 16prime (D16prime) with a XhoI site ***SalI site is gone*** =TRT 1 promoter with negative element deleted (region is marked by URA3+ insert ed downstream of H2B HB101.e... D16pUC13+ D16prime ampR
FB1407 pMS18 Michelle Swanson pRS316 + 3.2kb NruI frag from pMS4 containing SPT5. REF: Swanson et al MCB vol.11 no.6 June 91 p.3009-3019.*NOT FUNCTIONAL COPY OF SPT5* unknown... pMS18 URA3 ampR CEN ARS SPT5
FB1408 pMS37 Michelle Swanson YCp50 cut HindIII and NruI + pMS4 HindIII-PvuII frag. REF: Swanson et al M CB vol.11 no.6 June 91 p.3009-3019 *NOT A FUNCTIONAL COPY OF SPT5* unknown... pMS37 URA3 ampR SPT5
FB1409 MB81 Michelle Swanson 2.6kb SalI frag containing SacB cloned into SalI site of pSELECT (now known as pALTER) *Strain is Amp SENSITIVE!* JM109.n... pMB81 SacB ori TetR ampS SP6 T7promoter
FB141 Winston DB6507.... pFW32-343 spt3-343
FB1410 MB88 Michelle Swanson = in vitro mutagenesis of PMB81 (FB1409). JM109.n... pMB88 SacB-BamHI mutant ampR TetR ori Sp6 T7promoter
FB1411 pRS12 Louis Prakash REF: MCB 1989 vol.9 no.5 p.1882-1896 unknown... pRS12 RAD9 2micron LEU2 ampR